Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 86.0 9e-12
>seq1388
Length=1638
Score = 86.0 bits (94), Expect = 9e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||||||||| | ||||| ||||||| || || || || | ||||| ||| ||
Sbjct 528 ATGCAAATATTCGTGAAAACTCTGACTGGTAAGACGATCACCCTTGAAGTGGAATCCTCG 469
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || ||||| | |||||| || || || ||||| || ||||| || ||
Sbjct 468 GATACCATTGAGAATGTGAAGACTAAAATTCAGGACAAGGAAGGTATTCCTCCGGACCAG 409
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | || | || ||||||||||| || || | || | || ||||| ||
Sbjct 408 CAACGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCCGATTACAAC 349
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| |||||| | || |||||| | |||
Sbjct 348 ATCCAGAAAGAGTCTACTCTTCATCTTGTG 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731842240254800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |