Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 102 2e-16
>seq1388
Length=1638
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | | || | ||| | ||| ||||| | || || || || || |||
Sbjct 527 ATACCACCACGCAAGCGAAGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCA 586
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || | ||| || ||||| ||||| | | || ||||| ||
Sbjct 587 GAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGG 646
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || ||| | || || || || | ||| || |||||
Sbjct 647 GGGATACCTTCCTTGTCTTGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCG 706
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| ||||||||||| || ||||| | || || | ||| |||||||||
Sbjct 707 ACTTCAAGAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757
Score = 93.3 bits (102), Expect = 8e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||||| | || | || | ||||| |||||| ||| || ||||| ||
Sbjct 73 ACCACCACGCAGACGAAGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGA 132
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || | || || | || ||||| || ||||| | | ||| || || || ||
Sbjct 133 AAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 192
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| ||||| || || ||| | || || || |||| || || ||||| ||
Sbjct 193 GATGCCTTCCTTATCCTGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCAC 252
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| ||||||||||| || ||||| | || || | || |||||||||
Sbjct 253 CTCAAGAGTAATGGTCTTTCCAGTAAGGGTCTTCACGAAAATCTGCATT 301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984438967796550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |