Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1388 102 2e-16 >seq1388 Length=1638 Score = 102 bits (112), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | || | ||| | ||| ||||| | || || || || || ||| Sbjct 527 ATACCACCACGCAAGCGAAGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCA 586 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | ||| || ||||| ||||| | | || ||||| || Sbjct 587 GAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGG 646 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || ||| | || || || || | ||| || ||||| Sbjct 647 GGGATACCTTCCTTGTCTTGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCG 706 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||||||||| || ||||| | || || | ||| ||||||||| Sbjct 707 ACTTCAAGAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757 Score = 93.3 bits (102), Expect = 8e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||||| | || | || | ||||| |||||| ||| || ||||| || Sbjct 73 ACCACCACGCAGACGAAGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGA 132 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || || | || || | || ||||| || ||||| | | ||| || || || || Sbjct 133 AAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 192 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| ||||| || || ||| | || || || |||| || || ||||| || Sbjct 193 GATGCCTTCCTTATCCTGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCAC 252 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || ||||||||||| || ||||| | || || | || ||||||||| Sbjct 253 CTCAAGAGTAATGGTCTTTCCAGTAAGGGTCTTCACGAAAATCTGCATT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984438967796550