Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6 122 7e-23 seq3070 86.0 5e-12 seq1388 84.2 2e-11 >seq6 Length=1299473 Score = 122 bits (134), Expect = 7e-23 Identities = 217/317 (68%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | ||||||||| |||||| ||||| || Sbjct 1128123 TCGGTCTCGGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGTTGATGAAGCCATCGAGG 1128064 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 | ||||| | ||| | | ||||||| |||||||| ||| | || |||| ||| Sbjct 1128063 TGATCCTGGAGCTTGGCAGCATCGTGGGCGCCGTTGATGATCCAACGGTCGTCCTTGGGG 1128004 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 || | | || || ||||| |||||| | ||||||||||| | ||| | ||| Sbjct 1128003 TCAATGTTTGTCTGAGCGCCAAGCTCGAAACCGAAGTACTTGATGACGTAGGCACCGGGA 1127944 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || |||| | || |||| | || |||||||| ||| |||||||||||||| || Sbjct 1127943 CGGGCAAGAGACTGAGCGACGCTGCTCAGGTTGACGACGACGGTCTTGATGCCGTTTCCT 1127884 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || ||||| | ||| | ||||||| ||| ||||| || ||||| |||| ||| Sbjct 1127883 TTGCCTTCAATCTTTGTCTGGATGCGCTCCATCTTGTAACGATAGAAGACGTCGCTGACA 1127824 Query 34618 TTGCGGTTAACGTTCAC 34634 | |||| ||||| || Sbjct 1127823 TCGCGGCGGACGTTGAC 1127807 >seq3070 Length=537 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || || |||||||| ||||||| || || || || ||||| ||| | Sbjct 22 AAGATGCAGATCTTCGTCAAAACGCTAACCGGAAAGACTATCACTCTCGAAGTAGAGTCA 81 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||| || || | || || |||||| ||||| ||||| | || |||| Sbjct 82 TCCGATAGCATCAGCAATGTGAAGACCAAGATTCAGGACAAGGAAGGAATTCCTCCGGAT 141 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || || | |||||| || || |||||||||| | | || || | || ||| Sbjct 142 CAGCAGCGCCTCATCTTTGCGGGAAAGCAACTGGAGGATGACCGCACTCTGTCCGACTAC 201 Query 110450 AACATTCAAAAAGAATCTAC 110469 |||||||| || || ||||| Sbjct 202 AACATTCAGAAGGAGTCTAC 221 >seq1388 Length=1638 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330 |||||| || |||||||| ||| | || || || |||||||| | ||| || | ||| Sbjct 757 AATGCAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTCTTGAAGTCGAATCCTC 698 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 ||||| ||| | || || |||||| ||||| ||||| | ||| ||||| Sbjct 697 T-GATACCATCGAGAACGTGAAGACTAAGATTCAAGACAAGGAAGGTATCCCCCCGGATC 639 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 | ||| | ||||| | || || || || || ||||||| | | || | | || |||| Sbjct 638 AGCAACGTCTTATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTTTCTGACTACA 579 Query 110451 ACATTCAAAAAGAATCTACGTTGCA 110475 ||||||| || ||||| || ||||| Sbjct 578 ACATTCAGAAGGAATCCACTTTGCA 554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412825232507729