Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1388 127 1e-24 seq8 127 1e-24 seq19 122 6e-23 seq15 114 8e-21 seq3070 104 2e-17 >seq1388 Length=1638 Score = 127 bits (140), Expect = 1e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || ||| |||| |||| || ||||||||||| |||||| Sbjct 566 TCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAG 625 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGGA 34905 || || |||||||| || | || | || |||||||| || | | || || || ||| Sbjct 626 ATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTC-TTGAATCTTAGTCTTCACGTT 684 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| || ||||| |||| || ||||||||||| || || ||||| || Sbjct 685 CTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTCTTTCCAGTAAGAGTCTTGAC 744 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 745 AAAAATCTGCAT 756 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||| ||||||||| || || ||||| || || |||| | || Sbjct 1091 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCGTCT 1150 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||| || |||||||||||||| | || | || |||||||| Sbjct 1151 TCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1210 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || ||| | || | || || ||| || |||| || |||||| Sbjct 1211 TGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTC 1270 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||| || || |||||||| Sbjct 1271 TTTCCGGTTAAGGTCTTGACGAAAATCTGCAT 1302 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || ||| ||||| ||||| || || || || |||| | || Sbjct 89 AGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCC 148 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | || ||||| || Sbjct 149 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 208 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || || || |||| || |||||| Sbjct 209 TGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTC 268 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| || || |||||||| Sbjct 269 TTTCCAGTAAGGGTCTTCACGAAAATCTGCAT 300 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| || ||| |||| | || || |||||||| || |||||| Sbjct 794 TCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCAAGTTGCTTACCAGCGAAG 853 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || |||||||| | || | || ||||| || | || || || ||| Sbjct 854 ATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGAATCTTAGTCTTCACGTTC 913 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || || ||| || |||| || ||||||||||| || | |||||| || Sbjct 914 TCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACG 973 Query 34967 AAGATCTGCAT 34977 || |||||||| Sbjct 974 AAAATCTGCAT 984 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||| ||||||||| ||||| ||||| || || | || | || Sbjct 1319 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCT 1378 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || ||||||||||| | || | || |||||||| Sbjct 1379 TCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1438 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || | ||| || || | || || | Sbjct 1439 TGGATCTTGGTCTTGAC--ATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGTAATAG 1496 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || | ||| || |||||||||||||| Sbjct 1497 TCTTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530 >seq8 Length=1068389 Score = 127 bits (140), Expect = 1e-24 Identities = 159/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||||| ||| ||||||||| ||||| || || ||| |||| |||| Sbjct 632049 AGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCC 631990 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||| ||||| |||||||| | || | ||||||||||| Sbjct 631989 TCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 631930 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || ||| |||||| |||| || || Sbjct 631929 TGAATCTTCGACTTCAC--AT--TGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGAT 631874 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || |||||||| || ||||||||||| Sbjct 631873 CGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 631838 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || ||| ||||| ||||| ||||| || ||| | || |||| Sbjct 631821 AGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTTCGACCATCC 631762 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||| ||||| ||||| || | || | ||||||||||| Sbjct 631761 TCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCC 631702 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| | ||| || || | ||| || ||| Sbjct 631701 TGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGGGTGATAGTC 631642 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| |||||||||||||| Sbjct 631641 TTACCGGTGAGGGTCTTGACAAAGATCTGCAT 631610 Score = 109 bits (120), Expect = 4e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 631311 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 631252 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| ||||||||||| || |||||||| | || | |||||||| || Sbjct 631251 TCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 631192 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || |||||| |||| ||| |||||| Sbjct 631191 TGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACCTCAAGGGTGATGGTC 631132 Query 34946 TTTCCCGT 34953 |||||||| Sbjct 631131 TTTCCCGT 631124 Score = 105 bits (116), Expect = 4e-18 Identities = 147/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||||||||| ||||| || ||| |||| |||| Sbjct 631593 AGGACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 631534 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||||| || |||||||| | || | |||||||| || Sbjct 631533 TCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCC 631474 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| | ||| || || | ||| || Sbjct 631473 TGGATCTTCGACTTGAC--AT--TGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGAT 631418 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 |||||| || ||||||||||| || Sbjct 631417 GGTCTTGCCGGTGAGGGTCTTGAC 631394 >seq19 Length=502728 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||||||||||||| ||||| ||||| || |||| |||| Sbjct 172589 AGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 172648 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| ||||| |||||||| | || | ||||||||||| Sbjct 172649 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 172708 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || |||| ||| || ||| Sbjct 172709 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 172768 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || ||||||||||| Sbjct 172769 TTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 172800 >seq15 Length=666898 Score = 114 bits (126), Expect = 8e-21 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || || |||| |||| || || ||||| || ||||||| Sbjct 143566 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 143507 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||||||| |||||||| | || | ||||||||||| | || || ||||| Sbjct 143506 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 143447 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || || |||||| |||| ||| |||||||| |||||||||||||| || | Sbjct 143446 CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 143387 Query 34968 A 34968 | Sbjct 143386 A 143386 >seq3070 Length=537 Score = 104 bits (114), Expect = 2e-17 Identities = 142/197 (72%), Gaps = 10/197 (5%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || |||| ||||| |||||||||||||| || || Sbjct 216 CTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGTCATCCTCCAGTTGCTTTCCCGCAAA 157 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTAT-TTTTTGTT----TG 34900 ||| || || ||||| || | || | || |||||||| | || || | || | Sbjct 156 GATGAGGCGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGAATCTTGGTCTTCACATT 97 Query 34901 ACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTC 34960 | |||||||||| | | ||| || || | || || |||||||| || || || Sbjct 96 GCTGATGCTATCGGAT-----GACTCTACTTCGAGAGTGATAGTCTTTCCGGTTAGCGTT 42 Query 34961 TTTACAAAGATCTGCAT 34977 || || ||||||||||| Sbjct 41 TTGACGAAGATCTGCAT 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325679887603607