Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq239 107 1e-17 seq1613 95.1 9e-14 >seq239 Length=36123 Score = 107 bits (118), Expect = 1e-17 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || || ||||||||| | | || |||||||||||||||||||||||| | || || ||| Sbjct 30535 GGCAAGGAAGGTCGTCTCCGTGGCAATTTGATGGGAAAGCGTGTCGATTTTTCGGCTCGT 30476 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || || ||| |||| | ||| || ||||| | ||||| |||||||| | || |||| Sbjct 30475 ACTGTCATCACTGGTGATGCCAATCTTTCTCTCCACGAAGTCGGTGTTCCCCGCAGTATT 30416 Query 432408 GCGA 432411 |||| Sbjct 30415 GCGA 30412 >seq1613 Length=1251 Score = 95.1 bits (104), Expect = 9e-14 Identities = 202/302 (67%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| || ||||| |||| | |||| ||| ||||| |||| ||| | || Sbjct 902 TCAAAGTCCTCACCACCCAGATGGGTATCTCCATTGGTAGCAAGCACTTCGAAGACGCCG 843 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 || || | | | ||| || ||||| |||||||| |||| ||| || | | | | Sbjct 842 TCGTCGATGGTAAGAAGTGTGACATCGAAAGTTCCACCTCCCAAATCGAAGACCAAAATA 783 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 ||| || || || || | ||||| || |||| |||||| ||||| || ||| Sbjct 782 TTC------TTCTCACCCTTCTTGTTCAGACCGTATGCAATAGCAGCGGCAGTAGGCTCA 729 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || ||||| | || ||||| || || ||||| | || || || || || || || | | Sbjct 728 TTGATAATACGCATGACATTGAGTCCTGCAATAGTACCCGCGTCCTTTGTCGCCTGGCGT 669 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | || || || || || || ||||| | ||| |||| | ||||||||||||| | Sbjct 668 TGAGCGTCATTGAAGTAAGCCGGGACAGTGACAACAGCATTCTTAACTTCTTTTCCAAGA 609 Query 282494 TA 282495 || Sbjct 608 TA 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740470691447178