Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq239 107 1e-17
seq1613 95.1 9e-14
>seq239
Length=36123
Score = 107 bits (118), Expect = 1e-17
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
|| || ||||||||| | | || |||||||||||||||||||||||| | || || |||
Sbjct 30535 GGCAAGGAAGGTCGTCTCCGTGGCAATTTGATGGGAAAGCGTGTCGATTTTTCGGCTCGT 30476
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || || ||| |||| | ||| || ||||| | ||||| |||||||| | || ||||
Sbjct 30475 ACTGTCATCACTGGTGATGCCAATCTTTCTCTCCACGAAGTCGGTGTTCCCCGCAGTATT 30416
Query 432408 GCGA 432411
||||
Sbjct 30415 GCGA 30412
>seq1613
Length=1251
Score = 95.1 bits (104), Expect = 9e-14
Identities = 202/302 (67%), Gaps = 6/302 (2%)
Strand=Plus/Minus
Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253
||||| || ||||| |||| | |||| ||| ||||| |||| ||| | ||
Sbjct 902 TCAAAGTCCTCACCACCCAGATGGGTATCTCCATTGGTAGCAAGCACTTCGAAGACGCCG 843
Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313
|| || | | | ||| || ||||| |||||||| |||| ||| || | | | |
Sbjct 842 TCGTCGATGGTAAGAAGTGTGACATCGAAAGTTCCACCTCCCAAATCGAAGACCAAAATA 783
Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373
||| || || || || | ||||| || |||| |||||| ||||| || |||
Sbjct 782 TTC------TTCTCACCCTTCTTGTTCAGACCGTATGCAATAGCAGCGGCAGTAGGCTCA 729
Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433
|| ||||| | || ||||| || || ||||| | || || || || || || || | |
Sbjct 728 TTGATAATACGCATGACATTGAGTCCTGCAATAGTACCCGCGTCCTTTGTCGCCTGGCGT 669
Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493
|| | || || || || || || ||||| | ||| |||| | ||||||||||||| |
Sbjct 668 TGAGCGTCATTGAAGTAAGCCGGGACAGTGACAACAGCATTCTTAACTTCTTTTCCAAGA 609
Query 282494 TA 282495
||
Sbjct 608 TA 607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740470691447178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |