Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq8 123 6e-23
seq1388 116 9e-21
seq3070 100 7e-16
>seq8
Length=1068389
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || || || ||||| | || ||||| |||||
Sbjct 631613 CAGATCTTTGTCAAGACCCTCACCGGTAAGACTATCACCCTCGAGGTGGAGTCATCTGAT 631672
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || ||| ||||| ||
Sbjct 631673 ACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAG 631732
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||| |||||||||||||||||| | || ||||| | || || | || |||||| ||
Sbjct 631733 CGACTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGAACCCTGTCTGACTACAACATC 631792
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||||||||||||||| ||||| ||| | |||||||
Sbjct 631793 CAGAAAGAGTCTACTCTACACCTGGTTCTCCGACTTCG 631830
Score = 100 bits (110), Expect = 7e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||| | ||| ||||| ||||||||||||||||||| || ||||||| || ||
Sbjct 631830 CGAAGTCGGAGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTT 631771
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||||| || |||||||||||||||||||| || || || |||
Sbjct 631770 CGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGA 631726
>seq1388
Length=1638
Score = 116 bits (128), Expect = 9e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || || ||| | || |||||| || ||||| | ||
Sbjct 285 AAGACCCTTACTGGAAAGACCATTACTCTTGAGGTGGAATCCTCCGACACTATTGAGAAC 226
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || ||||| || |||||| || | || ||||||
Sbjct 225 GTCAAGACTAAGATTCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTC 166
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | ||| | ||||||||||| ||||||||||||||
Sbjct 165 GCCGGTAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAACATCCAGAAAGAGTCT 106
Query 206365 ACTCTTCACCTTGT 206378
||||||||||||||
Sbjct 105 ACTCTTCACCTTGT 92
Score = 111 bits (122), Expect = 4e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || |||||||| | ||||||||| || || || | ||
Sbjct 513 AAAACTCTGACTGGTAAGACGATCACCCTTGAAGTGGAATCCTCGGATACCATTGAGAAT 454
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || ||||| || || ||||| ||| |||||| ||| | || ||||||
Sbjct 453 GTGAAGACTAAAATTCAGGACAAGGAAGGTATTCCTCCGGACCAGCAACGTCTCATCTTC 394
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | || || || | || | ||||||||||| ||||||||||||||
Sbjct 393 GCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCCGATTACAACATCCAGAAAGAGTCT 334
Query 206365 ACTCTTCACCTTGT 206378
|||||||| |||||
Sbjct 333 ACTCTTCATCTTGT 320
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| | ||||| || || || ||| | |||||||| ||| |||
Sbjct 1527 CAGATCTTTGTTAAAACCTTAACAGGCAAGACTATTACTCTCGAAGTGGAGTCTTCCGAC 1468
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||| ||| |||||| |||
Sbjct 1467 ACCATCGAGAATGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAGCAA 1408
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| || |||||| | ||||| || | ||| | | || |||||| ||
Sbjct 1407 CGTCTTATCTTCGCTGGCAAGCAGCTCGAAGACGGCCGTACTCTTTCTGACTACAACATC 1348
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||||||
Sbjct 1347 CAGAAGGAGTCCACCCTGCACCTTGT 1322
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| || || ||| | ||||| ||| |||||
Sbjct 753 CAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTCTTGAAGTCGAATCCTCTGAT 694
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||||||||| || ||||| || ||||| |||
Sbjct 693 ACCATCGAGAACGTGAAGACTAAGATTCAAGACAAGGAAGGTATCCCCCCGGATCAGCAA 634
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| |||||||| | || ||||| | || | | || |||||| |
Sbjct 633 CGTCTTATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTTTCTGACTACAACATT 574
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || ||| | || || ||
Sbjct 573 CAGAAGGAATCCACTTTGCATCTCGT 548
>seq3070
Length=537
Score = 100 bits (110), Expect = 7e-16
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||||||||| || ||||| || |||||| | ||||| || || ||
Sbjct 28 CAGATCTTCGTCAAAACGCTAACCGGAAAGACTATCACTCTCGAAGTAGAGTCATCCGAT 87
Query 206233 ACAGTCG--AATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290
| || ||| || ||| |||||||| || || ||||||||| ||||| |
Sbjct 88 AGCATCAGCAAT--GTGAAGACCAAGATTCAGGACAAGGAAGGAATTCCTCCGGATCAGC 145
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
| | || ||||| || |||||||| |||| |||| | ||| || |||| ||||||
Sbjct 146 AGCGCCTCATCTTTGCGGGAAAGCAACTGGAGGATGACCGCACTCTGTCCGACTACAACA 205
Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGT 206378
| ||||| ||||||||||| || |||||
Sbjct 206 TTCAGAAGGAGTCTACTCTACATCTTGT 233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181771542817013
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |