Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 93.3 4e-14
>seq1388
Length=1638
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || |||||||| ||| | ||| || || || ||||| ||||| |
Sbjct 335 GACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCG 394
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||| || || || ||||| || ||||| || || |||||| ||||
Sbjct 395 AAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGAATTTTAGTCTTCACA 454
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | | |||||||| | || | ||| |||||||||||||||||
Sbjct 455 TTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGTCTTACCAGTCAGAGTTTTC 514
Query 132110 ATGAAAATCTGCAT 132123
| ||| || |||||
Sbjct 515 ACGAATATTTGCAT 528
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || |||||||| ||| | || || || |||||||| |||||||
Sbjct 107 GACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCG 166
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || || || |||||||| ||||| ||| || || |
Sbjct 167 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGAATCTTAGTCTTGACG 226
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||| |||| | ||||| || | || | || || ||||| || || ||
Sbjct 227 TTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTCTTTCCAGTAAGGGTCTTC 286
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 287 ACGAAAATCTGCAT 300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476591819797080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |