Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1388 105 6e-18 >seq1388 Length=1638 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || ||||||||||| | ||||| | ||||| || || | Sbjct 1302 ATGCAGATTTTCGTCAAGACCTTAACCGGAAAGACCATCACTCTTGAAGTTGAGTCCTCC 1243 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||||||| | || || |||||| || || || ||||| || || || ||| Sbjct 1242 GACACTATCGAGAACGTTAAGACCAAAATTCAGGACAAGGAAGGTATTCCCCCGGACCAG 1183 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| ||||||||| || ||||| || |||||||| | | | | | | ||| |||||| Sbjct 1182 CAACGACTCATTTTCGCTGGCAAGCAGCTCGAAGACGGTCGCACTCTTTCCGACTACAAT 1123 Query 25355 ATTCAAAAAGAATCCACC 25372 || || || || |||||| Sbjct 1122 ATCCAGAAGGAGTCCACC 1105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445076301348960