Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 140 3e-28
seq8 116 4e-21
seq3070 107 2e-18
seq19 102 8e-17
seq5 87.8 2e-12
>seq1388
Length=1638
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | || |||| |||||| || || || ||||||||||| |||||||||||
Sbjct 756 TTCCGCCGCGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 815
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| |||| || ||| || || || || || || || || | ||||||||| || || |
Sbjct 816 ACAGGGTGCGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGG 875
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || || ||||| || || || || | |||||||| || || |
Sbjct 876 GGATGCCTTCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAA 935
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
| || ||||| ||||| || |||||||| || || |||||||| ||||||
Sbjct 936 CTTCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 985
Score = 134 bits (148), Expect = 1e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| ||||| || || || || || || |||||||| ||| || ||| ||
Sbjct 83 AGACGAAGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGA 142
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| || || || || || | ||||||||| || || || ||||||||
Sbjct 143 CCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCC 202
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| || | |||||||| |||||||| || ||||||
Sbjct 203 TTATCCTGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTA 262
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| || || || | || || |||||||| ||||||
Sbjct 263 ATGGTCTTTCCAGTAAGGGTCTTCACGAAAATCTGCATT 301
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | ||| || | ||| ||||| || ||||| ||||| || |||||||||||
Sbjct 1302 TTCCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 1361
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
|| || | ||| |||||||| ||||| || || || | ||| ||||| || || |
Sbjct 1362 AAAGAGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGG 1421
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || ||||| || || || || || ||||| || | |||||||| || ||||
Sbjct 1422 GAATACCTTCCTTGTCCTGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCA 1481
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||||||||| || || || ||||| |||||||| || || |||||
Sbjct 1482 CTTCGAGAGTAATAGTCTTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || | ||||||||||| |||||||||||||| || |||| | || |||
Sbjct 548 ACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 607
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| || || || || || || | ||| |||||||| || || || ||||| || ||||||
Sbjct 608 AGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTCTTGA 667
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || || | || || || ||||| || || ||||||||||| ||
Sbjct 668 ATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTCTTT 727
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || | ||| || || ||||| ||||||
Sbjct 728 CCAGTAAGAGTCTTGACAAAAATCTGCATT 757
>seq8
Length=1068389
Score = 116 bits (128), Expect = 4e-21
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| || || || ||||| ||||||||||||||| | |||| | || ||
Sbjct 631590 ACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 631531
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| ||||| |||||||| || || || || || || || || ||
Sbjct 631530 AGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGG 631471
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||| || || ||||| ||||| || ||||| ||
Sbjct 631470 ATCTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTG 631411
Query 134685 CCGGTTAAAGTTTTAACGA 134703
||||| | || || ||||
Sbjct 631410 CCGGTGAGGGTCTTGACGA 631392
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | || |||||||| || || || || || ||||||||||| | ||| ||
Sbjct 631827 AGTCGGAGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTTCGA 631768
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || || || | ||||||||||| || || ||||| ||
Sbjct 631767 CCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCCGGGGGAATGCCCTCC 631708
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| ||| | || || || || ||||| ||||| ||
Sbjct 631707 TTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGGGTG 631648
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| | || || || || || |||||
Sbjct 631647 ATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 631610
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||| ||||| || ||||||||||||
Sbjct 631326 CCACCACGGAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 631267
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| || || || || |||| ||||||||| || || ||
Sbjct 631266 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 631207
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | || || || || || ||
Sbjct 631206 ATGCCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACC 631147
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| || || ||||| || || ||
Sbjct 631146 TCAAGGGTGATGGTCTTTCCCGT 631124
>seq3070
Length=537
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| || ||||| || || ||||| ||||||||||||||| | ||| |
Sbjct 242 AGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGG 183
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || || || || || ||||| || | ||||||||||| || || || |||||
Sbjct 182 TCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCCTTCC 123
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || || || | | ||| | ||||| || || || ||||||||
Sbjct 122 TTGTCCTGAATCTTGGTCTTCACATTG-CTGATGCTATCGGATGACTCTACTTCGAGAGT 64
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||||| ||||| ||||| || ||||| |||
Sbjct 63 GATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTTG 21
>seq19
Length=502728
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || ||| ||||| || |||||||||||||
Sbjct 172574 CCACCACGGAGGCGGAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 172633
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || |||||||| || || ||||| || | |||||||| || || ||
Sbjct 172634 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 172693
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | |||||||| || |||||
Sbjct 172694 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 172753
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || || || || | || || ||||| || ||||| |||
Sbjct 172754 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 172804
>seq5
Length=1316942
Score = 87.8 bits (96), Expect = 2e-12
Identities = 244/371 (66%), Gaps = 10/371 (3%)
Strand=Plus/Plus
Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291
|||||| |||| ||||| || ||||| | || | |||||||||||| ||||| ||
Sbjct 714395 CGCCATCCTCGAGGCTCAAACTGAGACCGGCAACCCCTTCATGCTGTACAAGGACGCATG 714454
Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351
|||| ||| ||||| || | ||| |||||||||| | || ||| || ||| ||||
Sbjct 714455 CAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAGCTCCAACCTCTGCACTGA 714514
Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411
|| | ||||| | || || || || || || || || || || || || || | |
Sbjct 714515 GATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGTAACCTTGCCTCCCTGGCTCT 714574
Query 8412 AAACGCGTTCGTTGATCGACGCTCAAACA---CT--TACGACTTTGAACAATTGAAAAAC 8466
|| |||||| ||||| ||| | || |||||||| | | || | |
Sbjct 714575 ----GCCTTCGTTTGTCGAC-TACAACGAGGGCTGCTACGACTTCAAGAAGCTGCACGAA 714629
Query 8467 GCCGTGCAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTG 8526
| | || || || ||||| || | ||||| || ||||| || ||| |
Sbjct 714630 GTCACCCAGGTCGTTGTCCGCAACTTGAACAAGATCATCGACGTCAACCACTACCCCGTC 714689
Query 8527 GAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTG 8586
|| || ||| |||||||||||||||||| ||||||| || || || |||||
Sbjct 714690 ATTGAGGCTCGCAACAGCAACATGCGCCACAGACCCATTGGCGTTGGTGTCCAGGGTCTT 714749
Query 8587 GCCGACGCGTT 8597
||||| || ||
Sbjct 714750 GCCGATGCCTT 714760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505377849237560
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