Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1388 104 2e-17 >seq1388 Length=1638 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||| || || ||||| ||| | |||| |||| |||||||| |||||| Sbjct 104 GTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTACCG 163 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | || || ||||| ||||| | || Sbjct 164 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGAATCTTAGTCTTG 223 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | || ||| || || ||||| || | || || || || || Sbjct 224 ACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTCTTTCCAGTAAGGGTC 283 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| || || ||||| Sbjct 284 TTCACGAAAATCTGCAT 300 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | |||| || | ||| | ||||| || ||||| || |||||||| | Sbjct 758 CCGCCGCGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 817 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| || || || ||||| ||| | ||||||||||| || ||||| || Sbjct 818 AGGGTGCGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 877 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || ||||| ||||| | |||| | | || | |||||| | || |||||| Sbjct 878 ATGCCTTCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAACT 937 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | || || || | || || || || || ||||| Sbjct 938 TCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCAT 984 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||| || || ||||| ||| | | |||| |||| || ||||| ||||| Sbjct 332 GTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCA 391 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | |||||||| || || ||||| || | ||| || || || || || | ||| Sbjct 392 GCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGAATTTTAGTCTTC 451 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || | || ||| ||||| || || || | || || ||||||||| Sbjct 452 ACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGTCTTACCAGTCAGAGTT 511 Query 27231 TTCACAAAGATTTGCATA 27248 ||||| || ||||||||| Sbjct 512 TTCACGAATATTTGCATA 529 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || |||||||||||| | |||| ||||||||||||| || || Sbjct 1106 GTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCA 1165 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||| || || || ||||| || | ||| || || || || ||| | || Sbjct 1166 GCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTCCTTGTCCTGAATTTTGGTCTTA 1225 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | || |||||||| ||||| || | || || || | || Sbjct 1226 ACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTCTTTCCGGTTAAGGTC 1285 Query 27231 TTCACAAAGATTTGCAT 27247 || || || || ||||| Sbjct 1286 TTGACGAAAATCTGCAT 1302 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 ||||||||||||| || || ||| | || ||||| || || ||||| || | ||| || | Sbjct 1374 CGTCTTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTCCT 1433 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || ||||||| | || | | || | ||||| | | || ||||| ||||| | Sbjct 1434 TGTCCTGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGTAA 1493 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| ||||| || | ||||| |||||||| |||||| Sbjct 1494 TAGTCTTGCCTGTTAAGGTTTTAACAAAGATCTGCATA 1531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424917553077336