Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 250 3e-61
seq6 111 2e-19
seq16 104 3e-17
seq12 91.5 2e-13
>seq5
Length=1316942
Score = 250 bits (276), Expect = 3e-61
Identities = 1016/1580 (64%), Gaps = 37/1580 (2%)
Strand=Plus/Minus
Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583
||| ||||| || || || ||| |||||||||| | || || | | ||| | |||
Sbjct 715283 AATCTCCCACACAGTCTTGTACAGAGACTTGATATCAGCGGGAATGTTGGGGATGTCCTG 715224
Query 110584 GATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGA-GACCA-ATC 110641
||||||||| ||| | | || | | |||||| | | ||||| | | ||| |||
Sbjct 715223 GATGGAACCACCCTCGGCAATGATTCGGTTCTTCATGGCATCAGACCACAAGCCCATATC 715164
Query 110642 TTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTT 110701
|| ||||| |||| ||| |||||||| |||||||| || ||| |
Sbjct 715163 GACT--AGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGG 715106
Query 110702 CTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCG 110761
| | |||| ||||||| || || || ||||||||||| || || || | ||| || |
Sbjct 715105 CGCTGGTAAATGTTTGAGGTATAGGGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCGAA 715046
Query 110762 GTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATG 110821
|| ||| || ||||| || || | | | ||||| ||||| || | ||||||||
Sbjct 715045 GTACTGGCCGTAGGCATGGGGGCGAGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGACC 714986
Query 110822 CGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAA 110879
| || |||| |||||||| | | | || || ||||| |||| |||||||||
Sbjct 714985 TGCTCACGGAGAGTCTCCCAGTCCCAAAGGTCAGAG-GGCTTCACGTTCC-ACATGTCAA 714928
Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939
||||||| | || | || |||||||| |||| |||||| |||| || || | |
Sbjct 714927 ACTGAAGGATGCCCTCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCT 714868
Query 110940 CAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998
|| | | ||| | || ||||| ||||| || ||||| ||||| || |
Sbjct 714867 TGGCGAGCTGCACGGAG-GCAGTCAGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTG 714809
Query 110999 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 111058
|||| ||| || ||| || || || | ||| | || |||| ||
Sbjct 714808 TTCAGCTCACGAGCCTCAGGGGACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCA 714749
Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118
||||| || ||||| | ||||| |||||||| ||||| || || | ||| || ||||
Sbjct 714748 AGACCCTGGACACCAACGCCAATGGGTCTGTGGCGCATGTTG--CTGTTGCG-AGCCTCA 714692
Query 111119 A---CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175
| |||| || || ||| |||| ||| | || | ||| | || |||
Sbjct 714691 ATGACGGGGTAGTGGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGGTG 714632
Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235
| ||| || || || | | || | || | | | |||| || || ||
Sbjct 714631 ACTTCGTGCAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCAGA 714572
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
|| | || || | || || ||||| |||||| | |||||| | || ||
Sbjct 714571 GCCAGGGAGGCAAGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCA 714512
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || | |||||| || || || |||| ||||| ||||| ||||| ||||||
Sbjct 714511 GTGCAGAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAT 714452
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| |||||||| |||||| |||| | || ||||| || || | | ||| || || | |
Sbjct 714451 GCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTAC 714392
Query 111416 CA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCT--CC--GC--CTCGTACTT 111468
|| ||| || | | || |||| ||| || |||| || || |||||||||
Sbjct 714391 CACAACTTCTGAGCCTTC----ATGGTCTTG---CGACCCTTGCCAAGCTTCTCGTACTT 714339
Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528
||| | ||| || |||||||| || ||||| || || || || || ||
Sbjct 714338 CTCGTATAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGG 714279
Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588
|| | |||| ||| | || | |||||||||||||||||| || || || |||||
Sbjct 714278 GCACATCAGAGTCCAATCGCCGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCA 714219
Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648
|||| | || ||||| | || ||||||| | || ||||| || | ||
Sbjct 714218 AAGGGCTAGGAAAAGATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTC 714159
Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708
|||||||| | || |||||||||||| ||||| || |||| |||| || ||| |||
Sbjct 714158 CAGGAACTCGAAGACATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCG 714099
Query 111709 ---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765
||| | || | || || || || ||| ||| || || || ||||| |||||
Sbjct 714098 CTTGTTGCCACCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAAT 714039
Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825
| ||| | || ||| || || || ||| ||| | |||| | | | ||
Sbjct 714038 GACACCGTTGGAGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTG 713979
Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
|| | || ||||| |||||| ||| ||||| |||||| | | ||||| |
Sbjct 713978 AGCGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTC 713919
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
||||||||| | ||| |||||||| || | | |||||||| |||| ||| ||
Sbjct 713918 ATAGATACCCTCGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGG 713859
Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGAC 112003
|| |||||||| ||||| ||||| || | || || | ||| | |||| ||||
Sbjct 713858 CTGAGGGGTACCAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAAC--AGCTTGCTGGAC 713801
Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063
|| || ||| ||||||| |||| |||||||| || || |||||| | | ||
Sbjct 713800 ATGAGGTTGTAGGTCTCCAGGACACGCTCAATGTCATCGCCCCAGATGCCAACAGACACA 713741
Query 112064 CGCATGAACATGTACTGTGG 112083
||||||| ||||| ||| ||
Sbjct 713740 CGCATGATCATGTGCTGCGG 713721
>seq6
Length=1299473
Score = 111 bits (122), Expect = 2e-19
Identities = 334/505 (66%), Gaps = 22/505 (4%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||||| |||||||| |||||||||||||| ||| | ||| ||||| |||||
Sbjct 1188560 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 1188619
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484
||||| || || || ||| || | | | | || | | | || ||
Sbjct 1188620 AAGTCGAAGGGGTTGGTCGACTTGTAGACCTTCTCGTTGCCGAGAGCGACA------AGA 1188673
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|||||||| | || |||||||||||| ||| ||||||||||| |||| |||
Sbjct 1188674 AGACGATCGGCAACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGG 1188733
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
|| || || || || || |||| | ||||| || || || || | | ||||
Sbjct 1188734 GCGCAGGGCAGAGCCTCGGTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATG 1188793
Query 122605 GCGTGGATAGT-TTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661
| | ||| | ||| | ||| | | || | || | || || || |||
Sbjct 1188794 TCTTCGATGATCTTCTTGCTAGCACGACCCTTCAGATGAGAGTGGAGCAGG--CA-GGCG 1188850
Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721
|| || ||| || |||||||| || ||||| || || || |||||| || || |||
Sbjct 1188851 AAGTCAGTGTGAAGGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGGC 1188910
Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 122780
||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||||
Sbjct 1188911 ATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATACC 1188969
Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACC 122839
||| ||| ||||| |||| ||||| | ||| ||||| |||| | ||| | | | ||
Sbjct 1188970 CTCAACAGCAGCAAAGGCAACCAGGCGCTGGGCAAAGGA-CGAGTCCTTGTCCTGGATCC 1189028
Query 122840 ATTTCATTGCCCATTTCGCCTTCTT 122864
| || ||||| | ||||||||
Sbjct 1189029 ACCGGATGGCCCAGTCAGCCTTCTT 1189053
>seq16
Length=594729
Score = 104 bits (114), Expect = 3e-17
Identities = 179/260 (69%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA 11743
|| || |||||||| | ||||| || ||||||||||| ||||| | || | ||
Sbjct 133972 AAAAGTTCGCGAACTCGCTTGGCTCCAACACCAACAAAGATCTCATCGAACTCGCTACCA 134031
Query 11744 GAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTT 11803
|| | || ||| |||||| | |||||| |||| |||||| || || || ||||||
Sbjct 134032 GACATGTAGAAGAAGGGGACACCGGCTTCACCAGCGACGGCTCGTGCAAGAAGAGTCTTT 134091
Query 11804 CCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAA 11863
|| || || || || |||||||| | || ||| | ||||||||| ||
Sbjct 134092 CCAGTTCCAGGAGGGCCAACGAGAAGGACACCCTTGGGCAGCTTGGCACCGAGGTCAGTG 134151
Query 11864 TATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCA 11923
| | ||||| | ||||||||| || |||| |||| ||| || || |||||| |||||
Sbjct 134152 AACTTTTCGGGGTTCTTGAGAAACTCAACAACTTCTTGAAGCTCCTCCTTGGCCTCGTCA 134211
Query 11924 ATCCCCTCAACATCACTGAA 11943
|| | |||||| ||||
Sbjct 134212 CAACCGTGGACATCATTGAA 134231
>seq12
Length=695362
Score = 91.5 bits (100), Expect = 2e-13
Identities = 193/288 (67%), Gaps = 0/288 (0%)
Strand=Plus/Minus
Query 181799 AGAAGCGTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTT 181858
|| ||| ||| |||||| || || | ||| || | |||| |||||| ||| |||
Sbjct 133915 AGCAGCATCTGAACCACCGGCAAGTCGGGAACCGAAGTTTCCACTTGGCTCTAGACAGTT 133856
Query 181859 AATGTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACAC 181918
||||||||||| || | ||| | ||||| || ||| || | | ||| ||||
Sbjct 133855 GATGTTGTTTGAGCCGACAAAGTTCTGAGCCAAGCCAATGATCGTCTGCTGAAGAGACAT 133796
Query 181919 TTCACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCAT 181978
||||||||||||||| || | | || | ||| || | ||||| | |||||||| |
Sbjct 133795 TTCACCGTGGTGGTATGCCGTTTGCTCGGAAACGTAACCAGCCAATTCGACCACCTTCTT 133736
Query 181979 TTCATCTTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAG 182038
|| | | ||||| | | |||||||||||| || || || | || ||| || ||
Sbjct 133735 ATCCTTTACAAGGTTTCTCTTGAAGCAAGCATAGATGACCTTGCGTTGACCAGGTTTCAG 133676
Query 182039 ACCATCCGCCATATGGGCAATAGAGCGCTTGAGGTCTGCCAAACTGAA 182086
||||| || | ||| |||||| || ||| |||| |||||
Sbjct 133675 GCCATCGAGCACGGAAGGAATTGAGCGCATGTTGTCAGCCATGCTGAA 133628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628006462648800
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