Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 237 2e-57
>seq5
Length=1316942
Score = 237 bits (262), Expect = 2e-57
Identities = 1113/1750 (64%), Gaps = 53/1750 (3%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| ||||||||||| || |||||||| || |||||||| || | ||||| ||
Sbjct 715444 CGTAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGCTGGTA 715385
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| ||| | ||| || | |||| || ||| | ||||| ||||| ||||||
Sbjct 715384 ATCTTACCCATGGTAGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 715325
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGT 118012
|| || || || | ||| | || || || | || || |||||||||||
Sbjct 715324 GCACCTCGGTCGGCAGACATCTGGATGAC----TTGACGCTGGGAAATCTCCCACACAGT 715269
Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072
| |||| || ||| |||||| | || || | ||| | |||||||| |||||| |
Sbjct 715268 CTTGTACAGAGACTTGATATCAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACCCTC 715209
Query 118073 CTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTC 118129
| | |||| | | |||||| | | ||||| | || || | || ||||
Sbjct 715208 ---GGCAATGATTCGGTTCTTCATGGCATCAGACCACAAGCCCATATCGACTAGGTCCTT 715152
Query 118130 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 118189
| ||| |||||||| |||||||| || ||| || | | | || || ||
Sbjct 715151 GAGGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATGTT 715092
Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249
| || || ||||||||||| || ||||| || | ||| || | || ||| || ||
Sbjct 715091 TGAGGTATAGGGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTAGG 715032
Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309
|||||| || | ||| | |||||| || || || | ||| | | | || |||||
Sbjct 715031 CATGGGGGCGAGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGAGT 714972
Query 118310 GTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 118367
|||||||| | | | || | || | | | |||||| |||||||| ||||| ||
Sbjct 714971 CTCCCAGTCCCAAAGGTCAGAG--GGCTTCACGTTCCACATGTCAAACTGAAGGATGCCC 714914
Query 118368 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CG 118424
| || || || || |||| ||| || || ||||||| ||| || | | ||
Sbjct 714913 TCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCTGCACG 714854
Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484
||| | | ||||| ||||| || || || ||||| || | |||| |
Sbjct 714853 GAGGCAGTC---AGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCACGA 714797
Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544
||||| ||| || || | | || | || |||| || ||||| ||||||
Sbjct 714796 GCCTCAGGGGACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCAAGACCCTGGACA 714737
Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA---CGGGATAA 118601
|| | |||||| || | || | ||| || || ||||| ||| | |||| ||
Sbjct 714736 CCAACGCCAATGGGTCTGTGGCGCATGTTGCTGTTGCGAGC---CTCAATGACGGGGTAG 714680
Query 118602 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 118661
|| ||||| | | | || | || | || |||| |||| ||| || |||
Sbjct 714679 TGGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCAGC 714620
Query 118662 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721
|| | | | || | | || | | | |||| || ||| || || | || ||
Sbjct 714619 TTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCAGAGCCAGGGAGGCA 714560
Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781
|| ||||| |||| | |||||| || |||||| || || || ||||| | |||
Sbjct 714559 AGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTG 714500
Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841
|| || |||||||||| |||||| || || ||| ||| || || ||||||||
Sbjct 714499 GAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGTAC 714440
Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGC 118900
|||||| | || | || ||||| ||||| | || ||| || || | ||| | | || |
Sbjct 714439 AGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAACTTCTG- 714381
Query 118901 AGCTGGCACAGTGGCGTTGG----CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956
||| || ||| ||| || ||| |||| |||||||| ||| | ||| |
Sbjct 714380 AGCCTTCA---TGGTCTTGCGACCCTTGCCAAGCTTC-TCGTACTTCTCGTATAAGGCCT 714325
Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016
| ||||| || || | || | || || || || | ||||| | |||| ||
Sbjct 714324 CGAACTCCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCC 714265
Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076
| | || || ||||||||||||||||||||| || |||||||| || || ||| |
Sbjct 714264 AATCGCCGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCTAGGAAAA 714205
Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136
|||| || ||| | ||||| | || || || |||| |||| || || | ||
Sbjct 714204 GATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGA 714145
Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCC-----CTTACGACGACCAG 119190
|||||||||||| || || ||||| | |||| | |||| ||| | | |||
Sbjct 714144 CATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTT--GTTG-CCAC 714088
Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250
|||||| || || | |||||| ||| || ||||| ||||| ||||||| ||| | ||
Sbjct 714087 CCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCGTTGG 714028
Query 119251 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310
| || || || || ||| ||| | |||| | || | ||| || | ||
Sbjct 714027 AGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTGAGAC 713968
Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370
| ||||| || ||| ||| ||||| || ||| | ||||| || | ||||| || |
Sbjct 713967 CGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGATACCCT 713908
Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTAC 119430
|||| || |||| | | | ||||||||| |||| || ||| || ||||
Sbjct 713907 CGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGGGTAC 713848
Query 119431 CAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTA 119488
|||||||||| || || || | || ||| | ||| | |||| |||||| || |||
Sbjct 713847 CAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAAC--AGCTTGCTGGACATGAGGTTGTA 713790
Query 119489 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 119548
|||||||| ||| |||||| || || || || | || || ||||| | |||
Sbjct 713789 GGTCTCCAGGACACGCTCAATGTCATCGCCCCAGATGCCAACAGACACACGCATGATCAT 713730
Query 119549 GTATTGGGGT 119558
|| || |||
Sbjct 713729 GTGCTGCGGT 713720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618410052878680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |