Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 237 2e-57 >seq5 Length=1316942 Score = 237 bits (262), Expect = 2e-57 Identities = 1113/1750 (64%), Gaps = 53/1750 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| || |||||||| || | ||||| || Sbjct 715444 CGTAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGCTGGTA 715385 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||| | ||| || | |||| || ||| | ||||| ||||| |||||| Sbjct 715384 ATCTTACCCATGGTAGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 715325 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGT 118012 || || || || | ||| | || || || | || || ||||||||||| Sbjct 715324 GCACCTCGGTCGGCAGACATCTGGATGAC----TTGACGCTGGGAAATCTCCCACACAGT 715269 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | |||| || ||| |||||| | || || | ||| | |||||||| |||||| | Sbjct 715268 CTTGTACAGAGACTTGATATCAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACCCTC 715209 Query 118073 CTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTC 118129 | | |||| | | |||||| | | ||||| | || || | || |||| Sbjct 715208 ---GGCAATGATTCGGTTCTTCATGGCATCAGACCACAAGCCCATATCGACTAGGTCCTT 715152 Query 118130 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 118189 | ||| |||||||| |||||||| || ||| || | | | || || || Sbjct 715151 GAGGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATGTT 715092 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | || || ||||||||||| || ||||| || | ||| || | || ||| || || Sbjct 715091 TGAGGTATAGGGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTAGG 715032 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 |||||| || | ||| | |||||| || || || | ||| | | | || ||||| Sbjct 715031 CATGGGGGCGAGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGAGT 714972 Query 118310 GTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 118367 |||||||| | | | || | || | | | |||||| |||||||| ||||| || Sbjct 714971 CTCCCAGTCCCAAAGGTCAGAG--GGCTTCACGTTCCACATGTCAAACTGAAGGATGCCC 714914 Query 118368 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CG 118424 | || || || || |||| ||| || || ||||||| ||| || | | || Sbjct 714913 TCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCTGCACG 714854 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 ||| | | ||||| ||||| || || || ||||| || | |||| | Sbjct 714853 GAGGCAGTC---AGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCACGA 714797 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 ||||| ||| || || | | || | || |||| || ||||| |||||| Sbjct 714796 GCCTCAGGGGACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCAAGACCCTGGACA 714737 Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA---CGGGATAA 118601 || | |||||| || | || | ||| || || ||||| ||| | |||| || Sbjct 714736 CCAACGCCAATGGGTCTGTGGCGCATGTTGCTGTTGCGAGC---CTCAATGACGGGGTAG 714680 Query 118602 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 118661 || ||||| | | | || | || | || |||| |||| ||| || ||| Sbjct 714679 TGGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCAGC 714620 Query 118662 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 || | | | || | | || | | | |||| || ||| || || | || || Sbjct 714619 TTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCAGAGCCAGGGAGGCA 714560 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 || ||||| |||| | |||||| || |||||| || || || ||||| | ||| Sbjct 714559 AGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTG 714500 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 || || |||||||||| |||||| || || ||| ||| || || |||||||| Sbjct 714499 GAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGTAC 714440 Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGC 118900 |||||| | || | || ||||| ||||| | || ||| || || | ||| | | || | Sbjct 714439 AGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAACTTCTG- 714381 Query 118901 AGCTGGCACAGTGGCGTTGG----CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956 ||| || ||| ||| || ||| |||| |||||||| ||| | ||| | Sbjct 714380 AGCCTTCA---TGGTCTTGCGACCCTTGCCAAGCTTC-TCGTACTTCTCGTATAAGGCCT 714325 Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016 | ||||| || || | || | || || || || | ||||| | |||| || Sbjct 714324 CGAACTCCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCC 714265 Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076 | | || || ||||||||||||||||||||| || |||||||| || || ||| | Sbjct 714264 AATCGCCGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCTAGGAAAA 714205 Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136 |||| || ||| | ||||| | || || || |||| |||| || || | || Sbjct 714204 GATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGA 714145 Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCC-----CTTACGACGACCAG 119190 |||||||||||| || || ||||| | |||| | |||| ||| | | ||| Sbjct 714144 CATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTT--GTTG-CCAC 714088 Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250 |||||| || || | |||||| ||| || ||||| ||||| ||||||| ||| | || Sbjct 714087 CCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCGTTGG 714028 Query 119251 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310 | || || || || ||| ||| | |||| | || | ||| || | || Sbjct 714027 AGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTGAGAC 713968 Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370 | ||||| || ||| ||| ||||| || ||| | ||||| || | ||||| || | Sbjct 713967 CGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGATACCCT 713908 Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTAC 119430 |||| || |||| | | | ||||||||| |||| || ||| || |||| Sbjct 713907 CGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGGGTAC 713848 Query 119431 CAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTA 119488 |||||||||| || || || | || ||| | ||| | |||| |||||| || ||| Sbjct 713847 CAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAAC--AGCTTGCTGGACATGAGGTTGTA 713790 Query 119489 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 119548 |||||||| ||| |||||| || || || || | || || ||||| | ||| Sbjct 713789 GGTCTCCAGGACACGCTCAATGTCATCGCCCCAGATGCCAACAGACACACGCATGATCAT 713730 Query 119549 GTATTGGGGT 119558 || || ||| Sbjct 713729 GTGCTGCGGT 713720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618410052878680