Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 275 7e-69
seq6 131 2e-25
seq16 86.0 7e-12
>seq5
Length=1316942
Score = 275 bits (304), Expect = 7e-69
Identities = 933/1435 (65%), Gaps = 35/1435 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| ||| | | || || || || |||||||| ||||
Sbjct 713721 CCGCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGCGATGACATTGAGCGTGTC 713780
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
||||||| ||| || |||||| |||| | ||| | || || | || ||||| |
Sbjct 713781 CTGGAGACCTACAACCTCATGTCCAGCAAGCT--GTTTACCCATGCTTCGCCCACCCTTT 713838
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| |||||||| || ||||| |||| |||||||| | | || |||||||
Sbjct 713839 TCAACGCTGGTACCCCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAGGAGG 713898
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
| ||| | |||||||||| ||||| | | |||||| ||||| ||| |||||
Sbjct 713899 ATAGCATCGAGGGTATCTATGACACTCTCAAGACGTGTGCCATGATCTCCAAGATGGCTG 713958
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| ||||| || | || || | | | |||| | ||| ||| || || |
Sbjct 713959 GCGGTATCGGTCTCAACGCTCACCGTATCCGTGCCACTGGCTCTTACATTGCCGGTACCA 714018
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || | ||| | ||||| ||||| || || || ||| ||| || || || |
Sbjct 714019 ACGGTACCTCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGATACG 714078
Query 104580 TAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636
| | || | ||| ||| ||| || |||| |||| || ||||| |||||||
Sbjct 714079 TCGACCAGGGTGGCAACAAGCGACCGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACG 714138
Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696
||||| || | |||||||| || |||| ||||| || | || |||| || ||
Sbjct 714139 CGGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCCC 714198
Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756
||||||| ||| || || ||||| || ||||||||||||||| | |||||| ||| |
Sbjct 714199 GCGATCTTTTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAGCGGGTTGAGAAGAACG 714258
Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
|| ||||| |||| | || || || || ||||| || |||| | || ||||
Sbjct 714259 GCGATTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCCGACTGCTACGGCGAGG 714318
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTGCC 104874
|||| || ||| | ||| |||||||| |||| | | | | | || ||| ||
Sbjct 714319 AGTTCGAGGCCTTATACGAGAAGTACGA-GAAGCTTGGCAAGGGTC-GCAAGACCATGAA 714376
Query 104875 AGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACA 104933
||| | || | ||||| | || || ||| || ||||||| ||||| || | || | ||
Sbjct 714377 GGCT-CAGAAGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGACCGGCAACCCCTTCA 714435
Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 104993
|||| ||||| ||||| || |||| ||||| || || ||||| |||| ||| |
Sbjct 714436 TGCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCA 714495
Query 104994 GTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 105053
| ||||| ||||| || || ||| | || | | | |||||| ||||| ||||
Sbjct 714496 GCTCCAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGTA 714555
Query 105054 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTGATTA 105111
|||| || || | ||||| || || ||| || | | | || | | | | || |
Sbjct 714556 ACCTTGCCTCCCTGGCTCTGCCTTCGTTTGTCGA-CTACA-ACGAGGGCTGCTACGACTT 714613
Query 105112 TGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAG 105171
| || || |||||||| || | || | ||| | |||| | || ||
Sbjct 714614 CAAGAAGCTGCACGAAGTCACCCAGGTCGTTGTCCGCAACTTGAACAAGATCATCGACGT 714673
Query 105172 AAATTTTTACCCCG---TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228
|| ||||||| ||||| ||||| || || ||| | ||| | || |||||
Sbjct 714674 CAACCACTACCCCGTCATTGAG---GCTCGCAACAGCAACATGCGCCACAGACCCATTGG 714730
Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 105288
| ||||| |||||||| || |||| ||| | | |||| | || || |||
Sbjct 714731 CGTTGGTGTCCAGGGTCTTGCCGATGCCTTCCTCGCTCTTCGCATGCCCTTCGAGTCCCC 714790
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
|| || || | || || |||||||||||||| || ||||| || || ||
Sbjct 714791 TGAGGCTCGTGAGCTGAACAAGCAGATATTTGAGACCATCTACCACGCTGCCCTGACTGC 714850
Query 105349 --GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
|| | || | || ||| | || || || |||||| |||| ||||| |||
Sbjct 714851 CTCCGTGC--AGCTCGCCAAGGAGCAGGGCCCCTACTCCACCTTTAAGGGCTCTCCCGCT 714908
Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTCACTACGA 105462
|| | || | ||||| ||||| |||| |||| |||| || | ||| | ||
Sbjct 714909 TCTGAGGGCATCCTTCAGTTTGACATGT-GGAACGTGAAGCCCTCTGACCTT---TGGGA 714964
Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522
|||||| ||||| || | |||||||| | || ||||| ||||| | ||| | ||
Sbjct 714965 CTGGGAGACTCTCCGTGAGCAGGTCAAGGAGCATGGCCTTCGCAACAGCTTGCTCCTCGC 715024
Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582
|| ||||| || ||| || | || ||| | || || || ||||||||||| |||||
Sbjct 715025 CCCCATGCCTACGGCCAGTACTTCGCAGATCCTAGGCAACAACGAATGCTTTGAGCCCTA 715084
Query 105583 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637
|| | ||||| || | | | | ||| || || ||||| | ||||||||
Sbjct 715085 TACCTCAAACATTTACCAGCGCCGTGTCCTGGCTGGTGAGTTCCAGGTTGTCAAC 715139
>seq6
Length=1299473
Score = 131 bits (144), Expect = 2e-25
Identities = 160/213 (75%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||||| || || | |||||| || || ||||| || |||| | | |||| | | |
Sbjct 1189069 AGTTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGGTGGATCCAGGACAAGGACTC 1189010
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
|| ||||||| |||| || | || ||||| ||||||||||||||||||| |||
Sbjct 1189009 GT-CCTTTGCCCAGCGCCTGGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTG 1188951
Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911
|||| ||| | || | |||||||||||||| || |||||||| || || |||||||
Sbjct 1188950 CCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCC 1188892
Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||| || |||||||| ||||| || |||
Sbjct 1188891 AACGAGCTGATTTCTCGTGATGAGGGCCTTCAC 1188859
>seq16
Length=594729
Score = 86.0 bits (94), Expect = 7e-12
Identities = 165/241 (68%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817
|| || || || || |||||||| || ||||||||||| ||||| | || | || |
Sbjct 133972 AAAAGTTCGCGAACTCGCTTGGCTCCAACACCAACAAAGATCTCATCGAACTC-GCTACC 134030
Query 9818 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9876
|||| | || |||||||||| | |||||| || | |||||| || |||||||||||
Sbjct 134031 AGACATGTAGAAGAAGGGGACACCGGCTTCACCAGCGACGGCTCGTGCAAGAAGAGTCTT 134090
Query 9877 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAA 9936
|| || || || || |||| ||| |||| || | |||||| || ||
Sbjct 134091 TCCAGTTCCAGGAGGGCCAACGAGAAGGACACCCTTGGGCAGCTTGGCACCGAGGTCAGT 134150
Query 9937 GTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTC 9996
| | | || || | ||| ||||| || |||| ||||| | || || ||||| ||||
Sbjct 134151 GAACTTTTCGGGGTTCTTGAGAAACTCAACAACTTCTTGAAGCTCCTCCTTGGCCTCGTC 134210
Query 9997 A 9997
|
Sbjct 134211 A 134211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583237083157720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |