Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 291 9e-74
seq12 161 1e-34
seq6 120 3e-22
>seq5
Length=1316942
Score = 291 bits (322), Expect = 9e-74
Identities = 508/731 (69%), Gaps = 26/731 (4%)
Strand=Plus/Plus
Query 53233 GCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAAC 53292
|||||||| ||||| ||| || | ||| | ||| ||||| || || |||| ||
Sbjct 713774 GCGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTTACCCATGCTTCGCCCAC 713833
Query 53293 CCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAA 53352
||| |||||||||||||| ||| || ||| |||| |||||||||||| | |||||
Sbjct 713834 CCTTTTCAACGCTGGTACCCCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTTGACATGAA 713893
Query 53353 GGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTG 53412
||| || ||||| || ||||| || || |||||| ||||||| |||||||||
Sbjct 713894 GGAGGATAGCATCGAGGGTATCTATGACACTCTCAAGACGTGTGCCATGATCTCCAAGAT 713953
Query 53413 GTCGGGTGGTATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAG 53470
| | || ||||||||| || || |||| | ||| |||||| | ||| | ||
Sbjct 713954 GGCTGGCGGTATCGGTCTCAAC-GCTC-ACCGTATCCGTGCCACTGGCTCTTACATTGCC 714011
Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530
|| || ||||| | || | || || | || |||||||| |||||||||||||| ||
Sbjct 714012 GGTACCAACGGTACCTCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAACAACACTGCT 714071
Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590
|| |||||| |||||||||| ||||| ||| | ||||||||||||||||||||
Sbjct 714072 CGATACGTCGACCAGGGTGGCAACAAGCGACCGGGTGCTTTCGCCATCTACCTCGAGCCC 714131
Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650
|||||||| || | | ||||| || || ||||| ||| || || | |||||| |
Sbjct 714132 TGGCACGCGGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAAGAGGTC 714191
Query 53651 CGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAG 53710
||| ||| || || || ||| || ||||| || || ||||||||| | ||| |||
Sbjct 714192 CGCGCCCGCGATCTTTTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAGCGGGTTGAG 714251
Query 53711 AAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTA 53769
||| ||| || ||| ||||||||||| ||||||||||| |||| | | | || |||
Sbjct 714252 AAGAACGGCGATTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCCGACTG-CTA 714310
Query 53770 CGGTGAGGAGT--------TTA-ACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCT 53819
||| ||||||| ||| |||||| ||| || | | ||| |||| |||
Sbjct 714311 CGGCGAGGAGTTCGAGGCCTTATACGAGAAGTACGAGAAGCTTGGCA----AGGGTCGC- 714365
Query 53820 ACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGA 53879
|||| | ||||| | || | ||| | || |||||| || || ||||
Sbjct 714366 -----AAGACCATGAAGGCTCAGAAGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGA 714420
Query 53880 CGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACA 53939
| || | || | |||| |||||||| | |||| ||||||||||||||||||
Sbjct 714421 CCGGCAACCCCTTCATGCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACC 714480
Query 53940 TCGGCGTCATC 53950
| ||| ||||
Sbjct 714481 TGGGCACCATC 714491
Score = 93.3 bits (102), Expect = 5e-14
Identities = 302/458 (66%), Gaps = 17/458 (4%)
Strand=Plus/Plus
Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537
||||| |||||| | ||||| | || || ||||| || || || | |||||| |
Sbjct 714999 GGCCTTCGCAACAGCTTGCTCCTCGCCCCCATGCCTACGGCCAGTACTTCGCAGATCCTA 715058
Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597
||||||||||| || ||||| || || | ||||| |||| |||||| ||| ||
Sbjct 715059 GGCAACAACGAATGCTTTGAGCCCTATACCTCAAACATTTACCAGCGCCGTGTCCTGGCT 715118
Query 55598 GGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG 55657
|||||||| | ||||| ||| |||||||||| | || | ||||
Sbjct 715119 GGTGAGTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGACCTAGTCGATATGGGCTTGTGG 715178
Query 55658 AACCCGCAG--ATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG- 55712
| | | || |||| || || | ||| || || || ||| ||||| | |
Sbjct 715179 T--CTGATGCCATGAAGAACCGAATCAT-TGCCGAG-GGTGGTTCCATCCAGGACATCCC 715234
Query 55713 --AGATTCCT-CTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAG- 55768
| ||||| ||| | ||||| | ||| ||| |||||||||||| | |||
Sbjct 715235 CAACATTCCCGCTGA-TATCAAGTCTCTGTACAAGACTGTGTGGGAGATTTCCCAGCGTC 715293
Query 55769 -AGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAA 55827
|||| || | ||| ||| || || ||||| | ||| || ||||||||||| || ||
Sbjct 715294 AAGTC--ATCCAGATGTCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAA 715351
Query 55828 CATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAA 55887
|||| |||| || | ||| | ||| ||| | | | ||||||||| || |||||
Sbjct 715352 CATCCACATGAAGGACCCTACCATGGGTAAGATTACCAGCATGCACTTTGCTGGCTGGAA 715411
Query 55888 GAAGGGACTCAAGACGGGTATGTACTATCTGCGGACCC 55925
| || |||||||| || |||||||| || || ||||
Sbjct 715412 GCTCGGTCTCAAGACTGGCATGTACTACCTACGCACCC 715449
>seq12
Length=695362
Score = 161 bits (178), Expect = 1e-34
Identities = 223/310 (72%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352
|||| ||||||||||| ||||||||| ||| |||||||| ||||| ||||| ||
Sbjct 133947 GGTGAAAGGCGAGTGAAGGTGTAACGAGGGCTAGCAGCATCTGAACCACCGGCAAGTCGG 133888
Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412
| |||||| | |||||| ||||| | ||| | |||||| | ||| |||||||| |||
Sbjct 133887 GAACCGAAGTTTCCACTTGGCTCTAGACAGTTGATGTTGTTTGAGCCGACAAAGTTCTGA 133828
Query 117413 GCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCC 117472
|||||| | ||||| || || | ||||| ||||| || ||||| |||||
Sbjct 133827 GCCAAGCCAATGATCGTCTGCTGAAGAGACATTTCACCGTGGTGGTATGCCGTTTGCTCG 133768
Query 117473 GCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGC 117530
| ||||| || |||| | |||||||| | || | || ||||| |||||| ||
Sbjct 133767 GAAACGTAACCAGCCAATTCGACCACCTTCTTATCCTTTAC--AAGGTTTCTCTTGAAGC 133710
Query 117531 AGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAAC 117590
| ||||| || |||||||| |||| || ||||| ||||| |||| ||| || || |
Sbjct 133709 AAGCATAGATGACCTTGCGTTGACCAGGTTTCAGGCCATCGAGCACGGAAGGAATTGAGC 133650
Query 117591 GCTTGATGTC 117600
|| || ||||
Sbjct 133649 GCATGTTGTC 133640
Score = 129 bits (142), Expect = 6e-25
Identities = 208/299 (70%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085
|| |||||| |||| || | ||| || ||||| ||||| || || || | || ||
Sbjct 133938 CGAGTGAAGGTGTAACGAGGGCTAGCAGCATCTGAACCACCGGCAAGTCGGGAACCGAAG 133879
Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145
| |||| ||||| || ||||| |||||| | ||| || || |||||||||||
Sbjct 133878 TTTCCACTTGGCTCTAGACAGTTGATGTTGTTTGAGCCGACAAAGTTCTGAGCCAAGCCA 133819
Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205
| ||||| ||| ||| | |||||||||||| || ||||| ||||| | | |||
Sbjct 133818 ATGATCGTCTGCTGAAGAGACATTTCACCGTGGTGGTATGCCGTTTGCTCGGAAACGTAA 133759
Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265
|| ||||| | |||||||| | ||| | ||||| |||||| || || || ||
Sbjct 133758 CCAGCCAATTCGACCACCTTCTTATCCTTTACAAGGTTTCTCTTGAAGCAAGCATAGATG 133699
Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
|||||||| || ||||||| || || | |||| |||||| || ||| || ||||
Sbjct 133698 ACCTTGCGTTGACCAGGTTTCAGGCCATCGAGCACGGAAGGAATTGAGCGCATGTTGTC 133640
>seq6
Length=1299473
Score = 120 bits (132), Expect = 3e-22
Identities = 308/456 (68%), Gaps = 20/456 (4%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| |||||||| ||||| || || ||||||||||| || | | ||||||||||||||
Sbjct 1188560 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 1188619
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC----CCCAAACTGTGCCATGAG 74578
||||||| ||||| | | ||| | |||||| || | | | | || ||
Sbjct 1188620 AAGTCGAAGGGGTTGGTCGACTTGTAGAC---CTTCTCGTTGCCGAGA--GCGACAAGAA 1188674
Query 74579 G-CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTT 74637
| ||||| || || || | |||||||||| |||| | | | |||||||| ||
Sbjct 1188675 GACGATCGGCAACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGGG 1188734
Query 74638 TGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC-CATTGGACAATC 74696
||| ||||| |||||||||| ||||| |||| | | || || || | ||
Sbjct 1188735 CGCAGGGCAGAGCCTCGGTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTG-ATGATG 1188793
Query 74697 TTGTGAATG-TCTT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGC 74752
| | ||| |||| || || ||| || |||| ||||||| ||| | || |||
Sbjct 1188794 TCTTCGATGATCTTCTTGCTAG--CACGAC-CCTTCAGATGAGAGTGGAGCAGGCA-GGC 1188849
Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812
|| || || ||| ||||| | |||| || || || || | ||||||||
Sbjct 1188850 GAAGTCAGTGTGAAGGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGG 1188909
Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872
||| || ||||||||||| | ||| ||||||| | |||| ||| ||||||||||| ||
Sbjct 1188910 CATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACC 1188969
Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908
|| ||| |||||||| || ||||| || || ||
Sbjct 1188970 CTCAACAGCAGCAAAGGCAACCAGGCGCTGGGCAAA 1189005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547193748829400
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