Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq17 86.0 5e-12
>seq17
Length=588636
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 29851 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTC 29910
|||||| | ||| ||||| || |||| || |||| ||| ||||||||||| || ||
Sbjct 452102 GGGCTCGCGCTCTAGCTGGACGTTGAGCGCATCAACGTGATCGAGGTAGACGTGGGCATC 452161
Query 29911 TCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29970
|||| |||| | |||||| | | | | ||| || || | ||||| ||
Sbjct 452162 GCCCATAACGTGGGTGAGGCTTCCCGGAACCAACTCACAGACATGCGCGAGCATGTGAGT 452221
Query 29971 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 30030
|| || | ||||| || ||||| ||||| || ||||| |||||||| | || | |||
Sbjct 452222 TAGCAGCGCATAGCTCGCAATGTTGAAGGGCACGCCGAGACCCATGTCGCAAGATCGCTG 452281
Query 30031 GTAGAGCTGACA 30042
||||||||| ||
Sbjct 452282 GTAGAGCTGGCA 452293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406294291443276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |