Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq17 111 1e-19
>seq17
Length=588636
Score = 111 bits (122), Expect = 1e-19
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559
|||| ||||||| |||||||| || | ||||||| |||| || | ||| |
Sbjct 452085 AGCTCGGGGAACTCGCGGGGCTCGCGCTCTAGCTGGACGTTGAGCGCATCAACGTGATCG 452144
Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGA 6617
||||||| || ||||| |||| |||| | ||| ||| ||||||||| | ||
Sbjct 452145 AGGTAGACGTGGGCATCGCCCATAACGTGGGTGAG-GCTTCCC-GGAACCAACTCACAGA 452202
Query 6618 CATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACC 6677
|||| |||| ||||| || ||||| || || || ||||||||||| ||||| || | |
Sbjct 452203 CATGCGCGAGCATGTGAGTTAGCAGCGCATAGCTCGCAATGTTGAAGGGCACGCCGAGAC 452262
Query 6678 CCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
||||||| | ||||| || ||||||||||||
Sbjct 452263 CCATGTCGCAAGATCGCTGGTAGAGCTGGCAG 452294
Score = 111 bits (122), Expect = 1e-19
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || ||||| | |||||||| | || ||||| ||||||||||| ||
Sbjct 452294 CTGCCAGCTCTACCAGCGATCTTGCGACATGGGTCTCGGCGTGCCCTTCAACATTGCGAG 452235
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
|| || ||||| || ||||| |||| |||||| | ||||||||| ||| |||
Sbjct 452234 CTATGCGCTGCTAACTCACATGCTCGCGCATGTCTGTGAGTTGGTTCC-GGGAAGC-CTC 452177
Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813
| |||| |||| ||||| || ||||||| | ||| | || |||| |||||
Sbjct 452176 ACCCACGTTATGGGCGATGCCCACGTCTACCTCGATCACGTTGATGCGCTCAACGTCCAG 452117
Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845
|| | || |||||||| ||||||| ||||
Sbjct 452116 CTAGAGCGCGAGCCCCGCGAGTTCCCCGAGCT 452085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448244172530160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |