Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq17 111 1e-19 >seq17 Length=588636 Score = 111 bits (122), Expect = 1e-19 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559 |||| ||||||| |||||||| || | ||||||| |||| || | ||| | Sbjct 452085 AGCTCGGGGAACTCGCGGGGCTCGCGCTCTAGCTGGACGTTGAGCGCATCAACGTGATCG 452144 Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGA 6617 ||||||| || ||||| |||| |||| | ||| ||| ||||||||| | || Sbjct 452145 AGGTAGACGTGGGCATCGCCCATAACGTGGGTGAG-GCTTCCC-GGAACCAACTCACAGA 452202 Query 6618 CATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACC 6677 |||| |||| ||||| || ||||| || || || ||||||||||| ||||| || | | Sbjct 452203 CATGCGCGAGCATGTGAGTTAGCAGCGCATAGCTCGCAATGTTGAAGGGCACGCCGAGAC 452262 Query 6678 CCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 ||||||| | ||||| || |||||||||||| Sbjct 452263 CCATGTCGCAAGATCGCTGGTAGAGCTGGCAG 452294 Score = 111 bits (122), Expect = 1e-19 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || ||||| | |||||||| | || ||||| ||||||||||| || Sbjct 452294 CTGCCAGCTCTACCAGCGATCTTGCGACATGGGTCTCGGCGTGCCCTTCAACATTGCGAG 452235 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 || || ||||| || ||||| |||| |||||| | ||||||||| ||| ||| Sbjct 452234 CTATGCGCTGCTAACTCACATGCTCGCGCATGTCTGTGAGTTGGTTCC-GGGAAGC-CTC 452177 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 | |||| |||| ||||| || ||||||| | ||| | || |||| ||||| Sbjct 452176 ACCCACGTTATGGGCGATGCCCACGTCTACCTCGATCACGTTGATGCGCTCAACGTCCAG 452117 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845 || | || |||||||| ||||||| |||| Sbjct 452116 CTAGAGCGCGAGCCCCGCGAGTTCCCCGAGCT 452085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448244172530160