Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1388 91.5 1e-13 >seq1388 Length=1638 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||||||||| ||||| || || || |||| || ||| | | Sbjct 528 ATGCAAATATTCGTGAAAACTCTGACTGGTAAGACGATCACCCTTGAAGTGGAATCCTCG 469 Query 27850 GA--CGATGTACAATCGGTCAA-ACAAAAAAT-AGCCGACAAAGAAGGTGTTCCGATGGA 27905 || | || | ||| || || || |||| | || ||||| |||||| |||| ||| Sbjct 468 GATACCATTGAGAAT--GTGAAGACTAAAATTCAG--GACAAGGAAGGTATTCCTCCGGA 413 Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965 |||||||| | || || || || || || | || |||| |||| | | |||||||| Sbjct 412 CCAGCAACGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCCGATTA 353 Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||| |||||| ||| | ||| | || | ||| | ||||| || Sbjct 352 CAACATCCAGAAAGAGTCTACTCTTCATCTTGTGCTCCGTCTACGTGGTGG 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355848291501531