Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 91.5 1e-13
>seq1388
Length=1638
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || ||||||||||| ||||| || || || |||| || ||| | |
Sbjct 528 ATGCAAATATTCGTGAAAACTCTGACTGGTAAGACGATCACCCTTGAAGTGGAATCCTCG 469
Query 27850 GA--CGATGTACAATCGGTCAA-ACAAAAAAT-AGCCGACAAAGAAGGTGTTCCGATGGA 27905
|| | || | ||| || || || |||| | || ||||| |||||| |||| |||
Sbjct 468 GATACCATTGAGAAT--GTGAAGACTAAAATTCAG--GACAAGGAAGGTATTCCTCCGGA 413
Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965
|||||||| | || || || || || || | || |||| |||| | | ||||||||
Sbjct 412 CCAGCAACGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCCGATTA 353
Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||| |||||| ||| | ||| | || | ||| | ||||| ||
Sbjct 352 CAACATCCAGAAAGAGTCTACTCTTCATCTTGTGCTCCGTCTACGTGGTGG 302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355848291501531
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |