Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq8 176 1e-38
seq1388 170 4e-37
seq19 149 1e-30
seq3070 140 8e-28
seq15 129 1e-24
>seq8
Length=1068389
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| || || ||||| ||||| |||||||| |||||||| || || | |||||
Sbjct 631831 ACGAAGTCGGAGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 631772
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || |||||||| || || || || || || |||| ||
Sbjct 631771 TCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCCGGGGGAATGCC 631712
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || ||||| |||||||| ||||| || ||||||||
Sbjct 631711 CTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAG 631652
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| ||||| | ||||||
Sbjct 631651 GGTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 631610
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| |||||||| || ||||| || |||||||| ||||| |||||
Sbjct 632059 ACGAAGACGGAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGT 632000
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| ||||||||||| || || |||||||| || || ||||| || |||| ||
Sbjct 631999 GCGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCC 631940
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| ||||| || |||||||| || | || ||||| ||
Sbjct 631939 CTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAG 631880
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||||||| || || ||||| || || | ||||||
Sbjct 631879 AGTGATCGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 631838
Score = 150 bits (166), Expect = 4e-31
Identities = 146/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| ||||||||||| || |||||||| || || | ||||| | || ||
Sbjct 631311 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 631252
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || ||||| || || | || ||||| |||
Sbjct 631251 TCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 631192
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||| || || ||| || ||||| || ||||| |||
Sbjct 631191 TGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACCTCAAGGGTGATGGTC 631132
Query 211083 TTTCCCGT 211090
||||||||
Sbjct 631131 TTTCCCGT 631124
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| || || ||||| || || ||||| || || | |||||
Sbjct 631603 ACGAAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 631544
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| || ||||| | ||| || ||||| || |||| ||
Sbjct 631543 GCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACC 631484
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||||||||| || || || ||||| |||||||| || ||||||||
Sbjct 631483 CTCCTTATCCTGGATCTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAG 631424
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
||||| ||||| || ||||| ||||| ||
Sbjct 631423 GGTGATGGTCTTGCCGGTGAGGGTCTTGAC 631394
>seq1388
Length=1638
Score = 170 bits (188), Expect = 4e-37
Identities = 167/213 (78%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| |||||||| |||||||| |||||||| ||||| | ||||| | || ||
Sbjct 317 AGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCC 376
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || ||||| ||||| ||||||| ||||||||||||
Sbjct 377 TCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCC 436
Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
|| || ||| || ||||| || || ||||| || ||| ||| || || || ||||||||
Sbjct 437 TGAAT-TTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGT 495
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || ||||| || || || | |||||
Sbjct 496 CTTACCAGTCAGAGTTTTCACGAATATTTGCAT 528
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || |||||||| || || | ||| || | || |||
Sbjct 1319 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCT 1378
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| ||||| ||||| || |||| ||||||||||||
Sbjct 1379 TCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1438
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||| || || || |||||||| || |||
Sbjct 1439 TGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGTAATAGTC 1498
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | || || ||||| | ||||||
Sbjct 1499 TTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530
Score = 168 bits (186), Expect = 2e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||||||||| |||||||| |||||||| ||||| | ||| || | || ||
Sbjct 89 AGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCC 148
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || ||||| || || | |||||||| |||
Sbjct 149 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 208
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || || ||||| ||| ||| ||||| ||||| || |||
Sbjct 209 TGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTC 268
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || ||||| || || | |||||||
Sbjct 269 TTTCCAGTAAGGGTCTTCACGAAAATCTGCATT 301
Score = 167 bits (184), Expect = 5e-36
Identities = 167/214 (78%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || ||||| || || || | ||| || | || |||
Sbjct 1091 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCGTCT 1150
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || || ||||| ||||| || |||| ||||||||||||
Sbjct 1151 TCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1210
Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
|| || ||| || || ||||| ||||| ||||| ||| ||||| || |||||||| ||
Sbjct 1211 TGAAT-TTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGT 1269
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|||||| || | ||||| || || | |||||||
Sbjct 1270 CTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 1303
Score = 163 bits (180), Expect = 7e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || | |||||| || || || ||||| || || | |||||| | |||||
Sbjct 545 AGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 604
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || ||||||||||| ||||| || || || || | |||||||||||
Sbjct 605 TCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTCT 664
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| |||||||| |||||||| |||||| ||| || || ||||| || |||
Sbjct 665 TGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTC 724
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || |||||||| ||||| | |||||||
Sbjct 725 TTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || || |||||||| || || ||||||||||| || || | |||||
Sbjct 764 CGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTG 823
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || || ||||| || |||||||| || || || ||||| || || | |||
Sbjct 824 CGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCT 883
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||| ||||| |||||||| ||||| ||||| ||| ||||| || |||
Sbjct 884 TCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGA 943
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| |||||||| || | ||||| || || | |||||||
Sbjct 944 GTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 985
>seq19
Length=502728
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| |||||| ||| || |||||||| || || || || | |||||
Sbjct 172589 AGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 172648
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || |||||||| || || ||||| || || | || |||||||||
Sbjct 172649 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 172708
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || ||||| || |||||||||
Sbjct 172709 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 172768
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| ||||| || || | |||||| ||
Sbjct 172769 TTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 172803
>seq3070
Length=537
Score = 140 bits (154), Expect = 8e-28
Identities = 166/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || ||||| || ||||| ||||| || || ||||| || || | || ||
Sbjct 246 ACGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGT 187
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||| ||||| ||||| || || ||||| ||||| || || || ||||||| |||
Sbjct 186 GCGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCC 127
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||| ||||| ||||| || |||| | || || || || |||||
Sbjct 126 TTCCTTGTCCTGAATCTTGGTCTTCACATTGCTGATGCTATCGGATGACTCTACTTCGAG 67
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||| |||||||| || || || || || || | |||||| ||
Sbjct 66 AGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTT 22
>seq15
Length=666898
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | || || | ||||| || ||||||||||| ||||||||
Sbjct 143564 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 143505
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| || || | || ||||||||||||||||| || || || ||
Sbjct 143504 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 143445
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 143444 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 143386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159103687631345
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