Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8 176 1e-38 seq1388 170 4e-37 seq19 149 1e-30 seq3070 140 8e-28 seq15 129 1e-24 >seq8 Length=1068389 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| || || ||||| ||||| |||||||| |||||||| || || | ||||| Sbjct 631831 ACGAAGTCGGAGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 631772 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || |||||||| || |||||||| || || || || || || |||| || Sbjct 631771 TCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCCGGGGGAATGCC 631712 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || ||||| |||||||| ||||| || |||||||| Sbjct 631711 CTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAG 631652 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| ||||| | |||||| Sbjct 631651 GGTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 631610 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| |||||||| || ||||| || |||||||| ||||| ||||| Sbjct 632059 ACGAAGACGGAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGT 632000 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| ||||||||||| || || |||||||| || || ||||| || |||| || Sbjct 631999 GCGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCC 631940 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| ||||| || |||||||| || | || ||||| || Sbjct 631939 CTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAG 631880 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||||||| || || ||||| || || | |||||| Sbjct 631879 AGTGATCGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 631838 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||||||||| || |||||||| || || | ||||| | || || Sbjct 631311 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 631252 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || || ||||| || || | || ||||| ||| Sbjct 631251 TCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 631192 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||| || || ||| || ||||| || ||||| ||| Sbjct 631191 TGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACCTCAAGGGTGATGGTC 631132 Query 211083 TTTCCCGT 211090 |||||||| Sbjct 631131 TTTCCCGT 631124 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| || || ||||| || || ||||| || || | ||||| Sbjct 631603 ACGAAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 631544 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| || ||||| | ||| || ||||| || |||| || Sbjct 631543 GCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACC 631484 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||||||||| || || || ||||| |||||||| || |||||||| Sbjct 631483 CTCCTTATCCTGGATCTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAG 631424 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| ||||| || ||||| ||||| || Sbjct 631423 GGTGATGGTCTTGCCGGTGAGGGTCTTGAC 631394 >seq1388 Length=1638 Score = 170 bits (188), Expect = 4e-37 Identities = 167/213 (78%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| |||||||| |||||||| |||||||| ||||| | ||||| | || || Sbjct 317 AGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCC 376 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || ||||| ||||| ||||||| |||||||||||| Sbjct 377 TCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCC 436 Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 || || ||| || ||||| || || ||||| || ||| ||| || || || |||||||| Sbjct 437 TGAAT-TTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGT 495 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || ||||| || || || | ||||| Sbjct 496 CTTACCAGTCAGAGTTTTCACGAATATTTGCAT 528 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || |||||||| || || | ||| || | || ||| Sbjct 1319 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCT 1378 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||||||||| ||||| ||||| || |||| |||||||||||| Sbjct 1379 TCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1438 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || || |||||||| || ||| Sbjct 1439 TGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGTAATAGTC 1498 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | || || ||||| | |||||| Sbjct 1499 TTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530 Score = 168 bits (186), Expect = 2e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||||||||| |||||||| |||||||| ||||| | ||| || | || || Sbjct 89 AGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCC 148 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || || ||||| || || | |||||||| ||| Sbjct 149 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 208 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| || || ||||| ||| ||| ||||| ||||| || ||| Sbjct 209 TGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTC 268 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || ||||| || || | ||||||| Sbjct 269 TTTCCAGTAAGGGTCTTCACGAAAATCTGCATT 301 Score = 167 bits (184), Expect = 5e-36 Identities = 167/214 (78%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || ||||| || || || | ||| || | || ||| Sbjct 1091 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCGTCT 1150 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || || ||||| ||||| || |||| |||||||||||| Sbjct 1151 TCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1210 Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 || || ||| || || ||||| ||||| ||||| ||| ||||| || |||||||| || Sbjct 1211 TGAAT-TTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGT 1269 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||| || | ||||| || || | ||||||| Sbjct 1270 CTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 1303 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || | |||||| || || || ||||| || || | |||||| | ||||| Sbjct 545 AGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 604 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||||||||| ||||| || || || || | ||||||||||| Sbjct 605 TCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTCT 664 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| |||||||| |||||| ||| || || ||||| || ||| Sbjct 665 TGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTC 724 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || |||||||| ||||| | ||||||| Sbjct 725 TTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || || |||||||| || || ||||||||||| || || | ||||| Sbjct 764 CGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTG 823 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || || ||||| || |||||||| || || || ||||| || || | ||| Sbjct 824 CGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCT 883 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||| ||||| |||||||| ||||| ||||| ||| ||||| || ||| Sbjct 884 TCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGA 943 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| |||||||| || | ||||| || || | ||||||| Sbjct 944 GTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 985 >seq19 Length=502728 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| |||||| ||| || |||||||| || || || || | ||||| Sbjct 172589 AGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 172648 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || |||||||| || || ||||| || || | || ||||||||| Sbjct 172649 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 172708 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||||||| Sbjct 172709 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 172768 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 172769 TTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 172803 >seq3070 Length=537 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| || ||||| ||||| || || ||||| || || | || || Sbjct 246 ACGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGT 187 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||| ||||| ||||| || || ||||| ||||| || || || ||||||| ||| Sbjct 186 GCGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCC 127 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||| ||||| ||||| || |||| | || || || || ||||| Sbjct 126 TTCCTTGTCCTGAATCTTGGTCTTCACATTGCTGATGCTATCGGATGACTCTACTTCGAG 67 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||| |||||||| || || || || || || | |||||| || Sbjct 66 AGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTT 22 >seq15 Length=666898 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || || | ||||| || ||||||||||| |||||||| Sbjct 143564 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 143505 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||||||||||||||| || || || || Sbjct 143504 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 143445 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || || Sbjct 143444 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 143386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159103687631345