Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 167 6e-36
seq8 143 6e-29
seq19 136 9e-27
seq15 120 7e-22
seq1621 111 4e-19
seq3070 107 5e-18
seq5 102 2e-16
>seq1388
Length=1638
Score = 167 bits (184), Expect = 6e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| || ||||| || ||||| |||| |||||||||| | || | || ||
Sbjct 317 AGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCC 376
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct 377 TCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCC 436
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || ||||||| || ||||| || |||| |||||| || | |||||||||
Sbjct 437 TGAATTTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGTC 496
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||| |||||| | ||| | ||||||
Sbjct 497 TTACCAGTCAGAGTTTTCACGAATATTTGCAT 528
Score = 158 bits (174), Expect = 3e-33
Identities = 153/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| |||||||| || ||||| || || |||| ||||| || | | ||| | || |||
Sbjct 1319 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCT 1378
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| |||||||||||||| ||||| ||||| || |||||||||||||||||
Sbjct 1379 TCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1438
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || | ||||| || | || || |||
Sbjct 1439 TGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGTAATAGTC 1498
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| || || |||||
Sbjct 1499 TTGCCTGTTAAGGTTTT 1515
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| |||||||| || ||||| || || |||| |||||| |||| | ||| | || |||
Sbjct 1091 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCGTCT 1150
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| |||||||| || |||||||| ||||| || |||||||||||||||||
Sbjct 1151 TCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1210
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || ||| || ||||| ||||| |||| || || || | ||||| |||
Sbjct 1211 TGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTC 1270
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || || || || || | ||| | ||||||
Sbjct 1271 TTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 1303
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||| || || || ||||| ||||| ||||||| ||||| || | || ||
Sbjct 764 CGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTG 823
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || || ||||| ||||||||||| || || || ||||| || || || |||
Sbjct 824 CGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCT 883
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||| || || ||||| |||||| ||||| ||||| |||| || || || |
Sbjct 884 TCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGA 943
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| ||||| || || || || || | ||| | ||||||
Sbjct 944 GTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 985
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || || || | ||||||||| || || | ||||| || | | || | |||||
Sbjct 545 AGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 604
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| |||||||||||||| ||||| || || || || |||||||||||||||
Sbjct 605 TCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTCT 664
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| |||||| |||||||| || |||| ||| || || | || || |||
Sbjct 665 TGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTC 724
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || || | ||| || | || | ||||||
Sbjct 725 TTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757
>seq8
Length=1068389
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| ||||| || || || || || |||| ||||||||| || ||
Sbjct 632059 ACGAAGACGGAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGT 632000
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||| ||||||||||| || |||||||| ||||| ||
Sbjct 631999 GCGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCC 631940
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||||||| |||||||| || || || || || |
Sbjct 631939 CTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAG 631880
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| || |||| || || | ||| | |||||
Sbjct 631879 AGTGATCGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 631838
Score = 131 bits (144), Expect = 4e-25
Identities = 143/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||||||||| || || |||| ||||| |||| | || | || ||
Sbjct 631311 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 631252
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || || || || ||||| ||
Sbjct 631251 TCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 631192
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||| || || |||| || || || | ||||| |||
Sbjct 631191 TGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACCTCAAGGGTGATGGTC 631132
Query 225682 TTGCCCGTCA 225691
|| |||||||
Sbjct 631131 TTTCCCGTCA 631122
>seq19
Length=502728
Score = 136 bits (150), Expect = 9e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||||||| || || |||| ||||| ||| || ||| | |||||
Sbjct 172589 AGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 172648
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||||||||| || ||||| || || || || ||||||||
Sbjct 172649 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 172708
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || | ||||| || | |||||||||
Sbjct 172709 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 172768
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||| | || || | ||| | ||||| ||
Sbjct 172769 TTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 172803
>seq15
Length=666898
Score = 120 bits (132), Expect = 7e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||| | ||||| || |||||||| |||||||||||
Sbjct 143564 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 143505
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
||||| || ||||| || || || || |||||||| |||||||| ||| ||| ||
Sbjct 143504 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 143445
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 143444 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 143401
>seq1621
Length=1240
Score = 111 bits (122), Expect = 4e-19
Identities = 176/249 (71%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 7478 TAGGTACTATATTTTCTATGATTATAAGGTTAGAA-TTAGCTGCTCCGGGTTCTCAAATA 7536
||||||| ||||| | | ||||| |||||| |||| || || ||| ||||
Sbjct 17 TAGGTACAGCCTTTTCAGTTTTAATAAGATTAGAACTTAG-TGGACCAGGTGTTCAA--- 72
Query 7537 TTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATT 7596
|| | | ||||| ||| | || || ||||||||| || || || | | |||||
Sbjct 73 TTTATTTCTAATAATCAATTATATAATAGTATTATTACAGCTCACGCTATCTTAATGATA 132
Query 7597 TTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATG 7656
|| ||| | |||||||| | | ||||| || || || |||| || | |||||||||
Sbjct 133 TTTTTTATGGTTATGCCTGCATTAATAGGAGGATTTGGTAATTTCTTAATGCCTTTAATG 192
Query 7657 ATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCG 7716
|| |||| ||||||||||| || || || | || ||||||||||| |||||| ||||
Sbjct 193 ATCGGTGGACCTGATATGGCATTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCT 252
Query 7717 CCTTCCTTA 7725
||| ||||
Sbjct 253 CCTAGCTTA 261
>seq3070
Length=537
Score = 107 bits (118), Expect = 5e-18
Identities = 161/227 (71%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || ||||| || ||||| || || || || | ||||| |||| || |||
Sbjct 246 ACGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGT 187
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||| || || ||||| || || ||||| || || || || || || ||||| ||
Sbjct 186 GCGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCC 127
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACA--GCTTCGATGGTGTCTGAGGTTTCCACGTCT 225669
||||||||| || ||||| ||||||| ||| |||| | || || | || || ||
Sbjct 126 TTCCTTGTCCTGAATCTTGGTCTTCACATTGCT--GATGCTATCGGATGACTCTACTTCG 69
Query 225670 AACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| ||||| ||||| || || | ||||| | ||| | ||||| ||
Sbjct 68 AGAGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTT 22
>seq5
Length=1316942
Score = 102 bits (112), Expect = 2e-16
Identities = 188/273 (69%), Gaps = 2/273 (1%)
Strand=Plus/Minus
Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559
||||||||| |||| || | ||||| ||||| | |||||||| |||| |||
Sbjct 714475 TTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCA 714416
Query 193560 GCTTGAGCGACGAGAATGTGATGCCA-AAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTT 193618
| |||||| |||| ||| | ||| || |||| |||| |||| ||| | | ||||
Sbjct 714415 GTTTGAGCCTCGAGGATGGCGTACCACAACTTCT-GAGCCTTCATGGTCTTGCGACCCTT 714357
Query 193619 TCCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAG 193678
|| | |||||||||| ||||| | |||| || || | |||||| ||| | ||
Sbjct 714356 GCCAAGCTTCTCGTACTTCTCGTATAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAG 714297
Query 193679 ACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCAT 193738
|| || || || ||||| | ||| ||||||| || | | || |||| ||||||
Sbjct 714296 GCCAGGGCACTCGTTGGGGCACATCAGAGTCCAATCGCCGTTCTTCTCAACCCGCTTCAT 714237
Query 193739 GAAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771
|||||| |||| |||||| ||| ||||||
Sbjct 714236 GAAGAGATCAGGGATCCAAAGGGCTAGGAAAAG 714204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192481496417582
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