Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq17 98.7 8e-16
>seq17
Length=588636
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 29623 GGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATC 29682
|||||| | ||| ||||| | | |||| || ||||| || ||||||||||| |||||
Sbjct 452102 GGGCTCGCGCTCTAGCTGGACGTTGAGCGCATCAACGTGATCGAGGTAGACGTGGGCATC 452161
Query 29683 TCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742
|||| |||| | |||||| | | | | ||| || || | ||||| ||
Sbjct 452162 GCCCATAACGTGGGTGAGGCTTCCCGGAACCAACTCACAGACATGCGCGAGCATGTGAGT 452221
Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802
|| || | ||||| || ||||| |||||||| ||||| |||||||| | || | |||
Sbjct 452222 TAGCAGCGCATAGCTCGCAATGTTGAAGGGCACGCCGAGACCCATGTCGCAAGATCGCTG 452281
Query 29803 GTAGAGCTGGCA 29814
||||||||||||
Sbjct 452282 GTAGAGCTGGCA 452293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406147097279158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |