Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq17 89.7 4e-13
>seq17
Length=588636
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 27117 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTC 27176
|||||| | ||| ||||| || |||| || |||||||| ||||||||||| || ||
Sbjct 452102 GGGCTCGCGCTCTAGCTGGACGTTGAGCGCATCAACGTGATCGAGGTAGACGTGGGCATC 452161
Query 27177 TCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236
|||| |||| | |||||| | | | | ||| || || | ||||| ||
Sbjct 452162 GCCCATAACGTGGGTGAGGCTTCCCGGAACCAACTCACAGACATGCGCGAGCATGTGAGT 452221
Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296
|| || | ||||| || ||||| ||||| || ||||| |||||||| | || | |||
Sbjct 452222 TAGCAGCGCATAGCTCGCAATGTTGAAGGGCACGCCGAGACCCATGTCGCAAGATCGCTG 452281
Query 27297 GTAGAGCTGACA 27308
||||||||| ||
Sbjct 452282 GTAGAGCTGGCA 452293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369492550540643
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |