Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 1e-29
>seq5
Length=1316942
Score = 145 bits (160), Expect = 1e-29
Identities = 324/484 (67%), Gaps = 2/484 (0%)
Strand=Plus/Minus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|||||||| || || |||||||||| | ||| || || | | || ||| || |||||
Sbjct 714295 CCAGGGCACTCGTTGGGGCACATCAGAGTCCAATCGCCGTTCTTCTCAACCCGCTTCATG 714236
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
||||||||||| ||||| || || | || ||||| |||| | ||||| || ||
Sbjct 714235 AAGAGATCAGGGATCCAAAGGGCTAGGAAAAGATCGCGGGCGCGGACCTCTTCCTTGCCG 714176
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| || || || ||||| | | ||| | ||||| || || || || ||
Sbjct 714175 TGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCCGCGTGCCAGGGCTCGAGGTAGATG 714116
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | | || ||||| || || || ||||| || | |||| || ||||| || |
Sbjct 714115 GCGAAAGCACCCGGTCGCTTGTTGCCACCCTGGTCGACGTATCGAGCAGTGTTGTTGAAG 714056
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| ||||| | |||||| || || || || || || | ||| ||| |||
Sbjct 714055 ACACGGAGCATGGGAATGACACCGTTGGAGGTACCGTTGGTACCGGCAATGTAAGAGCCA 713996
Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314
| || || ||| | | | || || || || |||||||| || || | ||
Sbjct 713995 GTGGCACGGATACGGTGAGCGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 713936
Query 78315 CAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373
| |||| || | || || ||||||||||| || || || ||| |||||| || || ||
Sbjct 713935 C-ACGTCTTGAGAGTGTCATAGATACCCTCGATGCTATCCTCCTTCATGTCAACCAGGAA 713877
Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433
||| ||||| || | ||| || || || || || | || || || ||||| ||
Sbjct 713876 GCAGGAAGACAGCTGGGGCTGAGGGGTACCAGCGTTGAAAAGGGTGGGCGAAGCATGGGT 713817
Query 78434 AAAC 78437
||||
Sbjct 713816 AAAC 713813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694640553029920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |