Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 150 4e-31
seq3070 122 2e-22
seq8 122 2e-22
seq19 113 1e-19
seq15 107 4e-18
>seq1388
Length=1638
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| ||||||||||||||||| |||||||||||||||| | ||| | || ||
Sbjct 89 AGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCC 148
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||||| | ||| |||||||| ||
Sbjct 149 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 208
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || ||||| |||| | |||| || || || ||||||||||| ||
Sbjct 209 TGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTC 268
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || ||||||||||| | |||||||
Sbjct 269 TTTCCAGTAAGGGTCTTCACGAAAATCTGCATT 301
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| ||||||||||||||||||||||| |||||||||||||||| | || | || ||
Sbjct 316 GAGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTC 375
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || |||||||| || | |||||||||| | || |||||||| ||
Sbjct 376 CTCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTC 435
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|||||||| || ||| |||| | | | || || || |||||||| || || ||
Sbjct 436 CTGAATTTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGT 495
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| |||||||| | |||||
Sbjct 496 CTTACCAGTCAGAGTTTTCACGAATATTTGCAT 528
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| ||||| || || || ||||| || ||||||||||| || | | ||| |
Sbjct 1312 GAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACG 1371
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || || ||||||||||| | |||||||||| | || |||||
Sbjct 1372 GCCGTCTTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTC 1431
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || |||||| |||| | | |||| ||| ||| ||||| |||||
Sbjct 1432 CTTGTCCTGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGT 1491
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||| ||||| || | || || || |||| ||||||
Sbjct 1492 AATAGTCTTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || |||||||||||||| || |||||||||||||| || | | || | || ||
Sbjct 773 AGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCGTCC 832
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| || | ||||||||||| | ||| |||||||| ||
Sbjct 833 TCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 892
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || || |||| | |||| || ||| ||||||||||| || ||
Sbjct 893 TGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTC 952
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || | ||||| ||||| | |||||||
Sbjct 953 TTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 985
Score = 109 bits (120), Expect = 1e-18
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| ||||| || || || ||||| || ||||| ||||| |||| | ||| |
Sbjct 1084 GAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCG 1143
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || || ||||| || || | |||||||||| | || |||||
Sbjct 1144 ACCGTCTTCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTC 1203
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || |||||||| || || |||| | |||| || ||| |||||||||||
Sbjct 1204 CTTGTCCTGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGT 1263
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || | ||||| ||||| | |||||||
Sbjct 1264 GATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 1303
Score = 107 bits (118), Expect = 4e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||| | ||| || || || || |||||||| || | | || | |||||
Sbjct 545 AGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 604
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || ||||||||||| | ||||| |||| | ||| |||||||| |
Sbjct 605 TCGAGTTGCTTT--CCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGT 662
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
||||||| || || || |||| | | | || || || |||||||||||||| |
Sbjct 663 CTTGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGG 722
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || || || |||||||| || || | |||||||
Sbjct 723 TCTTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757
>seq3070
Length=537
Score = 122 bits (134), Expect = 2e-22
Identities = 159/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| |||||||| ||||||||||| || || |||||||| |||| | ||| | ||||
Sbjct 237 GAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGTCATC 178
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || || ||||| || | |||||| |||| | |||||||||||
Sbjct 177 CTCCAGTTGCTTTCCC--GCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCCTTCCTTG 120
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| ||||| || || ||| | | ||| || || ||||||||| ||||| |||
Sbjct 119 TCCTGAATCTTGGTCTTCACATTGCTGATGCTATCGGATGACTCTACTTCGAGAGTGATA 60
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || ||||||| |||||| ||
Sbjct 59 GTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTT 22
>seq8
Length=1068389
Score = 122 bits (134), Expect = 2e-22
Identities = 160/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||| || || || |||||||||||||| ||||||||||| || | | ||||
Sbjct 631827 AGTCGGAGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTTCGA 631768
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
||||| || || ||||| ||||||||||| || | |||||| |||| | || || |
Sbjct 631767 CCATCCTCAAGCTGCTTT--CCGGCGAAGATGAGTCGCTGCTGATCCGGGGGAATGCCCT 631710
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || ||||| || ||||| | || | | | || || ||| || || || |
Sbjct 631709 CCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGGG 631650
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || || ||||| ||||| || |||| ||||||
Sbjct 631649 TGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 631610
Score = 113 bits (124), Expect = 1e-19
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || ||||| |||||||| || ||||||||||||||| | || | |||||
Sbjct 632050 GAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATC 631991
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || |||||||| | ||||||||| | | || || ||||| ||
Sbjct 631990 CTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 631931
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069
||||| || || ||| | || | | | | ||| | ||| || |||||||| ||
Sbjct 631930 CTGAATCTTCGACTTCACATTGTCGATGGTATCGCTGGA--CTCGACCTCAAGAGTGATC 631873
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || ||||||||||||| ||||||
Sbjct 631872 GTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 631838
Score = 91.5 bits (100), Expect = 3e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || |||||||| || || |||||||| |||| | || | |||||
Sbjct 631594 GAGGACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATC 631535
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || ||||| | | ||||||||||| | || || ||||| ||
Sbjct 631534 CTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACCCTCCTTATC 631475
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | |||| ||| ||| || || || || || ||
Sbjct 631474 CTGGATCTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGT 631415
Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094
||||| ||||| ||||| ||||
Sbjct 631414 CTTGCCGGTGAGGGTCTTGACGA 631392
Score = 84.2 bits (92), Expect = 5e-11
Identities = 102/137 (74%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || ||||| ||||| || ||||||||||| |||| | || |
Sbjct 631318 GAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 631259
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || || || ||||| || |||||||| || | ||||||||||| | ||| ||
Sbjct 631258 GCCGTCCTCGAGCTGCTTT--CCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCC 631201
Query 152004 TCCTTTTCTTGAATTTT 152020
||||| || || || ||
Sbjct 631200 TCCTTATCCTGGATCTT 631184
>seq19
Length=502728
Score = 113 bits (124), Expect = 1e-19
Identities = 160/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || ||||| ||| || ||||||||||| ||| | ||| |
Sbjct 172582 GAGGCGGAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCG 172641
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || |||||||| | ||||||||||| | ||| || ||
Sbjct 172642 GCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTC 172701
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| || ||||| ||
Sbjct 172702 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 172761
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| || || |||||||| ||||| ||||||| |||||| || ||
Sbjct 172762 GATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGCC 172806
>seq15
Length=666898
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | ||| | ||||| || || || || ||||||||
Sbjct 143564 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 143505
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | ||| || ||||| || || || || |||||| | ||
Sbjct 143504 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 143445
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || ||||| || || || ||||||||||| |||||||||||
Sbjct 143444 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 143386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153772709830763
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