Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 147 2e-30
seq19 143 2e-29
seq8 125 7e-24
seq15 116 3e-21
seq3070 111 1e-19
>seq1388
Length=1638
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | ||| || ||||| ||| ||||||||| || || ||||||||
Sbjct 1076 CCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAA 1135
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| |||||||||||||| ||||| || || || || ||||||| ||||
Sbjct 1136 AGAGTGCGACCGTCTTCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGA 1195
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| |||| | | |||| | | ||||||| ||||| ||
Sbjct 1196 ATACCTTCCTTGTCC-TGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAAC 1254
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || || || | ||||| ||||||||||||||
Sbjct 1255 TTCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCAT 1302
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| || || || || ||| ||||| ||||| || |||||
Sbjct 74 CCACCACGCAGACGAAGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAA 133
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||||||||| |||||||| || || ||||| ||||||| |||
Sbjct 134 AGAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 193
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| || ||||| ||| ||| | || | ||| | | | ||||||| || |||||
Sbjct 194 ATGCCTTCCTTATCC-TGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCAC 252
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || || || ||||| ||||||||||||||
Sbjct 253 CTCAAGAGTAATGGTCTTTCCAGTAAGGGTCTTCACGAAAATCTGCAT 300
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| | ||| ||||| || || ||| ||||| ||||| || ||||||
Sbjct 302 CCACCACGTAGACGGAGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAG 361
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || |||||||| || ||||| || || || || ||||||| |||
Sbjct 362 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGA 421
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| |||| | ||||| | | || || || |||||
Sbjct 422 ATACCTTCCTTGTCC-TGAATTTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCAC 480
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || ||||| ||||| ||||| || || ||||| || |||||
Sbjct 481 TTCAAGGGTGATCGTCTTACCAGTCAGAGTTTTCACGAATATTTGCAT 528
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|||||||| ||||| | ||| ||||| || || ||||| || ||||| ||||| ||
Sbjct 758 CCGCCGCGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 817
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || || ||||| || ||||| || || ||||| ||||||| |||
Sbjct 818 AGGGTGCGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 877
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| || ||||| ||| ||| | || | ||||| | | ||||||| ||||| ||
Sbjct 878 ATGCCTTCCTTATCC-TGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAAC 936
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || || || | ||||| ||||||||||||||
Sbjct 937 TTCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCAT 984
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | ||| || ||||| ||| ||||||||| ||||| ||||| ||
Sbjct 1304 CCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1363
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| |||||||||||||| ||||| || || || || ||||||| ||||
Sbjct 1364 AGAGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGA 1423
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | ||||||||| ||| || ||| | | | |||||| ||||||||
Sbjct 1424 ATACCTTCCTTGTCCTGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACT 1483
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || || || | || || || || ||||||||
Sbjct 1484 TCGAGAGTAATAGTCTTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||||| ||| |||||||||||||| ||||| || |||||||| | || |||
Sbjct 548 ACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCG 607
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|| ||||| || ||||| || || || || || |||| ||| | | ||||||| | ||
Sbjct 608 AGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGT-CTTG 666
Query 41774 ATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
| | || | ||||| | | || || || || || || | || || || ||
Sbjct 667 AATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTCTT 726
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || ||||| || |||||||||||
Sbjct 727 TCCAGTAAGAGTCTTGACAAAAATCTGCAT 756
>seq19
Length=502728
Score = 143 bits (158), Expect = 2e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || |||||||||||||| ||||| ||||||
Sbjct 172574 CCACCACGGAGGCGGAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 172633
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || ||||||||||| || || || || || ||||| ||||||| |||
Sbjct 172634 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 172693
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | |||||| ||||||||
Sbjct 172694 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCCAC 172752
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||| | || ||||| || ||||| || ||||| ||||| |||||||| ||
Sbjct 172753 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 172803
>seq8
Length=1068389
Score = 125 bits (138), Expect = 7e-24
Identities = 153/206 (74%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || || || || ||| ||||||||| ||||| |||||||||
Sbjct 631326 CCACCACGGAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 631267
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| ||||||||||| || ||||| ||||| ||||| ||||||| |||
Sbjct 631266 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 631207
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| || |||| ||| | | | ||| || ||||| ||
Sbjct 631206 ATGCCCTCCTTATCCTGGATCTTCGACTTC-ACGTTGTCGATAGTATCCGAGGACTCGAC 631148
Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840
||| | || || || || |||||||
Sbjct 631147 CTCAAGGGTGATGGTCTTTCCCGTCA 631122
Score = 123 bits (136), Expect = 2e-23
Identities = 139/184 (76%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||||||||||||||| ||||||||||||||||| | || || ||||||||||| || ||
Sbjct 631573 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 631514
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAAC 41788
|||| |||||| ||||||| ||||| | |||||| ||| ||| || ||| ||
Sbjct 631513 GATCAAGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTGACATT 631454
Query 41789 GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848
| || | |||||| ||||||||||| | || || || || || || || |||||
Sbjct 631453 GTCG--ATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTG 631396
Query 41849 ACGA 41852
||||
Sbjct 631395 ACGA 631392
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || || ||| ||||| ||||| ||||| ||
Sbjct 631836 CCACCACGAAGTCGGAGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGAC 631777
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || || |||||||| |||||||| || || ||||| || |||| ||||
Sbjct 631776 AGGGTTCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCCGGGGGA 631717
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || | | ||| | | | || || ||||||||
Sbjct 631716 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCAC 631658
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || ||||| || || ||||| || || ||||||||
Sbjct 631657 CTCGAGGGTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 631610
>seq15
Length=666898
Score = 116 bits (128), Expect = 3e-21
Identities = 137/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| ||||||||||| ||||| | || || ||||||||||| ||||| |
Sbjct 143566 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 143507
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||| ||||| ||||||| ||| | || |||||||||| ||| || ||| || |
Sbjct 143506 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACATTG 143448
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | ||||| ||||| ||||| | || || || || ||||| || ||||| |||
Sbjct 143447 TCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 143388
Query 41852 AAA 41854
|||
Sbjct 143387 AAA 143385
>seq3070
Length=537
Score = 111 bits (122), Expect = 1e-19
Identities = 167/233 (72%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| ||||| || || ||||||||||||||| ||||||||
Sbjct 251 CCACCACGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 192
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| || || || || ||||| || || || || |||||||| || |||| |||
Sbjct 191 AGAGTGCGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGA 132
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| | ||||||||| ||| | || | ||| || | || | | ||| |||||
Sbjct 131 ATTCCTTCCTTGTCC-TGAATCTTGGTCTTCACATTGCTGATGC--TATCGGATGACTCT 75
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || | || || || || || || ||||| || ||||| |||||||| ||
Sbjct 74 ACTTCGAGAGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTT 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462285201563600
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