Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isaria_20farinosa_20[genbank_20GCA_5F000733625.1_202014-07-25] 1,314 sequences; 34,157,461 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq708 120 3e-22 seq1080 93.3 5e-14 seq359 91.5 2e-13 >seq708 Length=22494 Score = 120 bits (132), Expect = 3e-22 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || |||||||| | || || || |||| || ||||||||||||||||| Sbjct 13037 CTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 12978 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || |||||||| || | || | | |||||||||| ||| |||| | |||| || Sbjct 12977 AATAAGGCGCTGCTGATCCGGGGGGATACCCTCCTTGTCC-TGAATTTTGGACTTGA-CG 12920 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | | | || ||| |||||||| || | || ||||| ||||| || || ||||| Sbjct 12919 TTGTCAATGGTATCGGAAGATTCCACCTCAAGGGTAATGGTCTTGCCGGTCAGGGTCTTG 12860 Query 43170 ACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 12859 ACGAAGATTTGCAT 12846 Score = 102 bits (112), Expect = 9e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | |||||||| || || ||||||||||| || ||| || | || || Sbjct 13510 ACCAAGTGGAGAGTGCTCTCTTTCTGGATATTGTAATCGCTCAAAGTGCGACCATCTTCC 13451 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||||||||| || ||||| || ||||| || | || | | |||||||||| | Sbjct 13450 AGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCAGGGGGGATACCCTCCTTGTCCTGG 13391 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 || || |||| ||| | | | |||||| || || || || | ||||| || || Sbjct 13390 ATCTTGGACTTGA-CGTTGTCAATCGTGTCTGAGGACTCAACCTCCAATGTGATCGTCTT 13332 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| ||||| || ||||| Sbjct 13331 TCCAGTGAGAGTCTTGACAAAAATCTGCAT 13302 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| |||| || ||||||||||| ||||| || || ||| || | Sbjct 13289 ACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGAATGTTGTAGTCGCTCAAAGTGCGACC 13230 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||||||||| || ||||| ||||||||||||| || | | |||||| Sbjct 13229 ATCTTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTT 13170 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || || | ||| | | | ||| || || || || || | || | Sbjct 13169 GTCTTGGATCTTAGACTTTA-CGTTGTCAATCGTATCTGAGGACTCGACTTCCAATGTAA 13111 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || || || ||||| || ||||||||||| Sbjct 13110 TTGTCTTTCCGGTGAGTGTCTTGACGAAGATTTGCAT 13074 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || | ||| || || | || || |||||||| |||||||| Sbjct 12809 CTCCTTCTGGATATTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 12750 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||||| || | || |||||||||| ||| | || | |||| Sbjct 12749 AATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC-TGAATCTTGGACTTGACAT 12691 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | || ||| || || || |||| |||||||| ||||| || Sbjct 12690 TGTCGATGGTATCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 12642 >seq1080 Length=90213 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || | |||||| || | || || |||||||| ||||| || | Sbjct 20692 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 20751 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 20752 TCAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 20811 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | ||||| || || || |||| |||||||| |||||||| || ||||| || | Sbjct 20812 CGATAGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 20871 Query 43174 A 43174 | Sbjct 20872 A 20872 >seq359 Length=177446 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||| || || | || || |||||||| ||||| || Sbjct 86388 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 86329 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 86328 GATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 86269 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || ||||| || | ||||| || || ||||| || ||||| || Sbjct 86268 GTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCCGTCAGGGTCTTGAC 86209 Query 43172 AAAGATTTGCATTTT 43186 || || ||||| || Sbjct 86208 GAAAATCTGCATCTT 86194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571808207895920