Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isaria_20farinosa_20[genbank_20GCA_5F000733625.1_202014-07-25] 1,314 sequences; 34,157,461 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1006 114 3e-20 seq66 104 5e-17 >seq1006 Length=9389 Score = 114 bits (126), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || || | |||||||| ||||| ||||| || ||||||||| | ||||| ||||| Sbjct 6462 CTCCCGTATCGCCGTCATTGGTCCCAACGGTGCTGGCAAGTCTACCTTGATCAACGTCCT 6403 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | ||||| |||| ||| |||| ||||| || || || Sbjct 6402 CACTGGTGAGCTCATCCCCACTCAGGGTGAGATTTATCAGCACGAGAACATCCGTATCGC 6343 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||| ||| |||||| || ||||||||||||| |||||| | | Sbjct 6342 CTACATCAAGCAGCACGCCTTCGCCCACATTGATAACCACCTGGACAAGACTCCCTCCGA 6283 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||||| |||||||| | | || | ||| |||||| ||| | |||| || Sbjct 6282 GTACATCCAGTGGCG-TTTCCAGACTGGTGAGGATCGCGAGACCATGGACCG 6232 Score = 109 bits (120), Expect = 1e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| || || || |||| ||||| ||||| ||| Sbjct 7277 GGTGAGGATCTGTGCAACTGCACCTTCTCCCTTGCCTACGGTGCCAAGATCCTGCTCAAC 7218 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| | ||||||||||| | || || |||||| ||||||||| || | Sbjct 7217 CAGACTCACCTCCGCCTCAAGCGTGGCCAGCGCTACGGTCTCTGCGGTCCCAACGGTTCC 7158 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||| ||||| |||| ||| | | ||| ||||| | ||| Sbjct 7157 GGCAAGTCCACCCTCATGCGTGCCATCAACAACGAGCAGGTTG-AGGGTTTCCCCAAGCA 7099 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| ||||||| Sbjct 7098 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTCGACTC 7057 Score = 102 bits (112), Expect = 2e-16 Identities = 96/120 (80%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| ||||| || ||| ||||| |||| ||| || || Sbjct 5873 CACTCGCGCATGCGCGGTCTGTCTGGTGGTCAGCGTGTCAAGACTGTCCTCGCCGCCTGC 5814 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | |||||| ||||||| ||||||||||||||||||||||| ||||| || Sbjct 5813 TC-GTGGCAGCGTCCTCACTTGATCGTCCTCGACGAGCCTACCAACTATCTCGACCGTGA 5755 >seq66 Length=78486 Score = 104 bits (114), Expect = 5e-17 Identities = 532/831 (64%), Gaps = 33/831 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||| ||||| |||||||| || Sbjct 24666 TCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATAAAGTCAAAGGGGTTGGTA 24725 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTAC--GAAGATGCGGTCTGCCACAAACTCCA 251680 | ||||| ||| | ||| || || || ||||| ||||| || |||||||| | Sbjct 24726 GACTTGTATACCTTCTCGTTGCCGAGAGCAACCAGAAGA--CGGTCAGCAACAAACTCAA 24783 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGA 251740 ||||| ||| || | ||||||||| | || || |||| ||||| | Sbjct 24784 TGTACTGCTGCATAAGGGTGGCGTTCATGCCCAGCAGGGCGCAGGGAAGAGCCTCTGTAA 24843 Query 251741 TGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA---CCTG--TGCCAG 251795 ||| ||||| || | | || || || | || | || | ||| ||| || Sbjct 24844 GGAACTCCTTCTCAATTGTGACAGCATCAGTGATGATGGTGTTGATAACCTCCTTGCTAG 24903 Query 251796 AGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGT--GCAGACCC 251853 || | ||||| || | |||| ||| || | |||| || ||| | |||||| Sbjct 24904 C-ACGG-TTGTTG---AGGTGGGAGTGCAGCAGGCAGGCAAA--GTCGGTATGGAGACCC 24956 Query 251854 TCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTG 251913 ||||| || ||||| ||||||||| | ||| || ||||||| ||||| ||| || Sbjct 24957 TCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGACCACGCTTCTTG 25016 Query 251914 AGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCA 251973 ||||||||||| | | ||||| || ||||| | | |||||| ||| | | ||| Sbjct 25017 AGCCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATACCCTCAACAGCAGCAAAGGCA 25076 Query 251974 ACAAGGCGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCC 252030 || || |||| ||||| |||| | | || | | | ||||| | ||| Sbjct 25077 ACGAGACGCTGGGCAAAGGTAGACTCCTTGTCGGAGATCCAGCGGAGGGCCCAATCAGCC 25136 Query 252031 TTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCG 252090 ||||| | | |||||| || || || |||| || || | | |||| ||| | Sbjct 25137 TTCTTGCGGATGCAGGGGATAGTGTCAATGGCATTGAACAGGTACGTGCGCTGGGCCTGC 25196 Query 252091 TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAAC 252150 |||| |||| | || | || |||||||| | || || || ||| || | | Sbjct 25197 TCCTTGATGTAGGTGTCGATGAGCAGAGAGTAAGTTTCAGAGTGAATGTTCTCCATCATG 25256 Query 252151 ATCTGGTAAGCATAGAATAGACGCGCGGAAGGG-TCGGTGACTT--CCGTGGAAAAGTTG 252207 |||||| || | ||||| || || ||| || | ||| | ||| |||| | Sbjct 25257 ATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTG-GACCTCGCCGCTGAAACG--C 25313 Query 252208 TTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTG 252267 | | | |||||| | || |||||||| | || |||||| |||||||| | Sbjct 25314 TCAACCAGGTTCTCATTGACGATGCCATCAGAAGCAGCGAAGAAGGCAAGAATGTGGGAG 25373 Query 252268 ATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGA 252327 ||||||| |||| ||| |||| || || ||||||| || |||| | ||| Sbjct 25374 ATGAAGTACTGCTCGTCGGCGTTCAGGCGGTTGTTCCAGTCGTGAAGATCCT--TGGAGA 25431 Query 252328 G---GAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375 | || | ||||| | |||||||| | || | ||||||||||||||| Sbjct 25432 GATCGATC-TCTTCGGCTGTCCAGAAAGAGGCTTCAGCCTTCTTGTACATT 25481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027819495725074