Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isaria_20farinosa_20[genbank_20GCA_5F000733625.1_202014-07-25] 1,314 sequences; 34,157,461 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq708 116 9e-21 seq359 116 9e-21 seq66 93.3 1e-13 >seq708 Length=22494 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || || |||||||| || || || | Sbjct 13072 CCACCACGGAGGCGGAGGACCAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAATCCGAA 13013 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||| || || ||||| ||| ||| Sbjct 13012 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAAATAAGGCGCTGCTGATCCGGGGGG 12953 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| ||||| | || ||||| || || | |||| ||||| || Sbjct 12952 ATACCCTCCTTGTCCTGAATTTTGGACTTGACGTTGTCAATGGTATCGGAAGATTCCACC 12893 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| |||||||| ||||||||||| || ||||| Sbjct 12892 TCAAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 12846 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | || | ||||| ||||| |||||||| || ||| Sbjct 13528 CCACCACGCAGACGAAGAACCAAGTGGAGAGTGCTCTCTTTCTGGATATTGTAATCGCTC 13469 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | || || || || ||||| ||||| || ||| | ||| Sbjct 13468 AAAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCAGGGGGG 13409 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | || || || || Sbjct 13408 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATCGTGTCTGAGGACTCAACC 13349 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||||||||| || || ||||||||||| || |||||||| Sbjct 13348 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 13302 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || |||||| | ||||| || ||||| | || || || || || Sbjct 13265 TTCCTTTTGAATGTTGTAGTCGCTCAAAGTGCGACCATCTTCCAGCTGCTTACCAGCAAA 13206 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| |||||||| || ||||| || || || || ||||| || | || ||||| Sbjct 13205 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTTGGATCTTAGACTTTACGTT 13146 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| || || ||||| | || || ||||| ||||| || |||||||| Sbjct 13145 GTCAATCGTATCTGAGGACTCGACTTCCAATGTAATTGTCTTTCCGGTGAGTGTCTTGAC 13086 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 13085 GAAGATTTGCAT 13074 >seq359 Length=177446 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||||| ||| || || ||||| || |||||| Sbjct 86423 CCACCACGAAGGCGTAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 86364 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||| ||||| || | || Sbjct 86363 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGA 86304 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||| || || || Sbjct 86303 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCCACC 86244 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct 86243 TCAAGGGTGATAGTCTTCCCCGTCAGGGTCTTGACGAAAATCTGCAT 86197 >seq66 Length=78486 Score = 93.3 bits (102), Expect = 1e-13 Identities = 171/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157 || || || |||| || || |||||| || || ||| | || || | || | || Sbjct 24871 GATGCTGTCACAATTGAGAAGGAGTTCCTTACAGAGGCTCTTCCCTGCGCCCTGCTGGGC 24812 Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG--G 269215 ||||| ||| || ||| | || || || || || || ||||| ||| |||| | | Sbjct 24811 ATGAACGCCACCCTTATGCAGCAGTACATTGAGTTTGTTGCTGACCGT--CTTCTGGTTG 24754 Query 269216 CACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTT 269275 | ||||| | ||||| || ||||| || | || ||||| | ||||||||| || | Sbjct 24753 CTCTCGGCAACGAGAAGGTATACAAGTCTACCAACCCCTTTGACTTTATGGAGAACATCT 24694 Query 269276 CGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGT 269334 | |||| || ||||| ||||||||||| |||||||| |||| || || | | || ||| Sbjct 24693 CCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTAGGCGAGTACCAGAAGGCC-GGT 24635 Query 269335 GTAATG 269340 || ||| Sbjct 24634 GTCATG 24629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179634539780892