Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isaria_20farinosa_20[genbank_20GCA_5F000733625.1_202014-07-25] 1,314 sequences; 34,157,461 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq356 96.9 4e-15 seq66 96.9 4e-15 >seq356 Length=66259 Score = 96.9 bits (106), Expect = 4e-15 Identities = 259/394 (66%), Gaps = 4/394 (1%) Strand=Plus/Plus Query 48156 CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATA 48215 ||||| || || ||||| ||||||| | ||| || ||| || | || | |||| Sbjct 7663 CCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCACCATTCTTCTCGACACGCTTCATG 7722 Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCA 48275 || | ||| || ||||| ||||| | |||| ||| | | | | ||||| |||||| Sbjct 7723 AACAGATCGGGGATCCAGAGAGCGAGGAATAGATCACGGGCACGAACCTCTTCCTTGCCA 7782 Query 48276 CTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATT 48335 ||| | || || || || || | | |||||| ||||| || || | || || Sbjct 7783 TGGTTCTTGCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCAGGGCTCGAGGTAGATG 7842 Query 48336 GCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAA 48395 || | |||| || ||||| |||||||| || || | ||||||||||||||||| | Sbjct 7843 GCAAAAGCACCGGGGCGTTTGTTACCTCCCTGGTCAACGTATCTGGCAGTATTGTTGAAG 7902 Query 48396 ACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCA 48455 || | | ||| || | | || || || |||||||||| || | ||| || || Sbjct 7903 ACACGAAGCATAGGAATGACGCCGTTAGAAGTACCATTGGTGCCAGCAATGTAGGAGCCG 7962 Query 48456 CTAGCTCTTATATTACTAA--TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAG 48513 | || | || || ||| | || |||||||||||||| || || || | | Sbjct 7963 GTGGCACGAATGCGGTGAACGTTG--AGGCCGATACCACCTGCCATCTTGGAGATCATGG 8020 Query 48514 CACACCGTTTAAGGGTATCATAAATTCCTTCTAT 48547 | || ||| || |||||||| || || || || Sbjct 8021 CGCAAGATTTGAGAGTATCATAGATGCCCTCGAT 8054 >seq66 Length=78486 Score = 96.9 bits (106), Expect = 4e-15 Identities = 357/558 (64%), Gaps = 5/558 (1%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||| || ||| || |||||||| | || | || || || || || | | Sbjct 24933 CAGGCAAAGTCGGTATGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGA 24992 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 || |||||||| || | || || | |||||| || || ||||| | || || ||||| Sbjct 24993 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAG 25052 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 ||||| || || || ||||| ||||| || | | || | ||| || || | Sbjct 25053 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGTAGACTCCTTGTCGGAG 25112 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200 ||||| || ||||||||||||||||| | || || || || || || | ||| Sbjct 25113 ATCCAGCGGAGGGCCCAATCAGCCTTCTTGCGGATGCAGGGGATAGTGTCAATGGCATTG 25172 Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260 || || ||| | |||| | || || | || | || || | | | ||| || Sbjct 25173 AACAGGTACGTGCGCTGGGCCTGCTCCTTGATGTAGGTGTCGATGAGCAGAGAGTAAGTT 25232 Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || || ||||| || || || ||||| || ||||| || || | || || | ||| Sbjct 25233 TCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATC 25292 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 || || || | | || | || |||| || ||||| || || |||||| ||| || Sbjct 25293 TGGACCTCGCCGCTGAAACGCTCAACCAGGTTCTCATTGACGATGCCATCAGAAGCAGCG 25352 Query 19381 AAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATG----TATTCCA 19436 || || || | | || || || | | || || | ||| | | | ||||| Sbjct 25353 AAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTC-GGCGTTCAGGCGGTTGTTCCA 25411 Query 19437 ATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTT 19496 || | || ||| || || | ||| | ||||| ||||||| ||||| || || || || Sbjct 25412 GTCGTGAAGATCCTTGGAGAGATCGATCTCTTCGGCTGTCCAGAAAGAGGCTTCAGCCTT 25471 Query 19497 TTTATACATGTTCCATAT 19514 || ||||| | ||| || Sbjct 25472 CTTGTACATTTGCCAGAT 25489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562099567362960