Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isaria_20farinosa_20[genbank_20GCA_5F000733625.1_202014-07-25] 1,314 sequences; 34,157,461 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq426 116 3e-21 >seq426 Length=324293 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 29760 CAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATC 29819 ||| || |||||| | ||||||| |||||||| ||| |||| || ||||| || Sbjct 260459 CAGCGTCGGAAAGTCGCGCGGCTCCCGTTCGAGCTGGACCTTGAGCGCGTCGACGTGGTC 260400 Query 29820 CAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGA 29878 |||||||||||| ||||| |||| | || | ||| | ||||| | || || || Sbjct 260399 CAGGTAGACGTGCGCGTCGCCCATGACCTGCGTCAAGGT-GCCCGGCACCAGGTCGCAGA 260341 Query 29879 CGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCC 29938 |||| || | ||||| ||| || || | ||||||||| ||||| || || || ||||| | Sbjct 260340 CGTGGGCGAGCATGTGCGTCAGCAGCGCGTAGCTGGCAATGTTGAACGGCACGCCGAGAC 260281 Query 29939 CCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 ||||||| | || | |||||| ||||| || Sbjct 260280 CCATGTCGCAGGAGCGCTGGTACAGCTGGCA 260250 Score = 98.7 bits (108), Expect = 8e-16 Identities = 266/403 (66%), Gaps = 8/403 (2%) Strand=Plus/Minus Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044 |||||||||||| | ||||| |||||||| || || |||||||| | ||| Sbjct 260141 CACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGAGCTTGAGGTCGCG 260085 Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104 ||||||||||| | | ||||||||| | ||| | || || || | |||||| Sbjct 260084 CGGGTTCCAGGCCGAGAGGATGATGCGGCGGTCGTAGGGCGTGCGCCGCAGCTTGTCCAC 260025 Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30164 ||| ||||| || || ||| || | |||||| | | ||| ||| || Sbjct 260024 CACGTCGGCGAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTCGCGGCGTCGACGTAGTC 259965 Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224 || || || || | ||||||||| ||||| || || || ||||| || | | | ||| Sbjct 259964 GGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACGGCGCGGTG 259905 Query 30225 CTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283 | || ||||| | ||| | || || | || |||||| ||||||||||||| || | Sbjct 259904 CCCG-AGCCCGGCGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGC 259846 Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343 || |||| ||| || ||| || |||||||||||||||||| ||| Sbjct 259845 CCGCCTCGCTCAGCGGCAGCGACGACGTGCTGCCCGCCACGAACCACAGCAGCTCCGCCA 259786 Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 | |||||| | || || | ||| ||||| || || || || Sbjct 259785 CCACGGCCCGCAGGAACACGCGCTTCGTCGTCAGCAGCGGCAA 259743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408611056244522