Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isaria_20farinosa_20[genbank_20GCA_5F000733625.1_202014-07-25] 1,314 sequences; 34,157,461 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq708 141 2e-28 seq359 141 2e-28 seq1080 136 1e-26 seq356 93.3 1e-13 >seq708 Length=22494 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || || ||||| ||||||||| || || Sbjct 12849 CAAATCTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTTGAGGTGGAATCTTCCGAT 12908 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| || ||||||||||| || || ||||| ||||| ||||| Sbjct 12909 ACCATTGACAACGTCAAGTCCAAAATTCAGGACAAGGAGGGTATCCCCCCGGATCAGCAG 12968 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| ||||| || || |||||||| || || | || ||| | ||||| ||| || Sbjct 12969 CGCCTTATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTTTCGGATTACAACATC 13028 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || || || Sbjct 13029 CAAAAGGAGTCTACCCTTCACCTGGT 13054 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||| |||||||| || ||| || |||||||| || ||||| Sbjct 12640 TCACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCCGATACCATCGACAATGTCAAGT 12699 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || |||||||| |||||||| || || || ||||| || | Sbjct 12700 CCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCTGGCA 12759 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || || |||| || || |||| || || || || || | Sbjct 12760 AGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAATATCCAGAAGGAGTCCACCCTCC 12819 Query 178123 ATCTTGT 178129 | || || Sbjct 12820 ACCTCGT 12826 >seq359 Length=177446 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || || || |||||||| |||||||| ||| ||| Sbjct 86200 CAGATTTTCGTCAAGACCCTGACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCCGAC 86259 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || || || || |||||||| Sbjct 86260 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAG 86319 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| | || || ||| || ||| || Sbjct 86320 CGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 86379 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || |||||||| Sbjct 86380 CAGAAGGAGTCCACCCTTCATCTTGT 86405 >seq1080 Length=90213 Score = 136 bits (150), Expect = 1e-26 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || || |||||||||||||| || ||| ||||| || Sbjct 20873 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACTAT 20814 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || ||||| || |||||||| || || Sbjct 20813 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCT 20754 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || |||||||| ||||| | ||||| |||| || ||| |||| || Sbjct 20753 GATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAA 20694 >seq356 Length=66259 Score = 93.3 bits (102), Expect = 1e-13 Identities = 186/271 (69%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 214123 CCAAAGTTTTTCTGGTTGCTTTTGCGGCA--AATGGCATCTTTGTATGCGATGAAAGGCA 214180 |||| ||| ||||||||||| |||||| | ||| || ||||| ||||| || Sbjct 7474 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGG--TCCTTGTAGAGCATGAAGGGGT 7531 Query 214181 TTCCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCT 214240 | || |||| ||||| | || ||| || |||||| | |||||||| | | || Sbjct 7532 TGCCGGTCTCGGTCTGAGCTTCCAGTATGGAATACCAGAGCTTCTGGGCCTTGATGGTCT 7591 Query 214241 TTTTGGCTCTT-CCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAG 214299 | | | ||| |||| | | ||||||||||| || |||| |||||| ||| |||||| Sbjct 7592 TGC-GACCCTTGCCCTGGCTCTCGTACTTTTCGTAGAGAGCCTCAAACTCCTCGCCGTAG 7650 Query 214300 ACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTG 214359 || |||| || || |||||| ||||| | ||| |||| | ||||| | | | Sbjct 7651 CAGTCGGCAAGGCCAGGGCACTCGTTAGGGCACATCAGAGTCCAGTCACCATTCTTCTCG 7710 Query 214360 ACTCTTTTCATGAAAAGGTCGGAAGTCCAGA 214390 || | |||||||| || |||| |||||| Sbjct 7711 ACACGCTTCATGAACAGATCGGGGATCCAGA 7741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203710934432916