Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 156 6e-33
>seq2
Length=2210479
Score = 156 bits (172), Expect = 6e-33
Identities = 275/399 (69%), Gaps = 4/399 (1%)
Strand=Plus/Minus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| ||||||| | |||||| ||| | || ||||| ||||| |||||||| || |||
Sbjct 1077578 GGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACTCGCTTCATGAAGAGATCGGGGATC 1077519
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|| ||||| | || |||||||||| | ||||| ||||| |||||| |||
Sbjct 1077518 CACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTTCCATGATTCTTGCGCAGA 1077459
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
|| | |||| | | | || |||||||| || | ||| ||||| | | || ||
Sbjct 1077458 TCCATGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGGG 1077399
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| ||||| || ||||| || | || | |||||||| || | || | | ||| ||
Sbjct 1077398 CGCTTGTTGCCGCCCTGGTCAACATAGCGGGCGGTGTTGTTGAACACGCGAAGCATGGGG 1077339
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATA--T 66324
|| ||||||||||| || |||||||| |||| ||||| || | ||||| |||
Sbjct 1077338 ATGATACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAACCGGTAGCACGGATACGG 1077279
Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
| |||| ||||| || || || ||||| || ||||| | ||||| || | |
Sbjct 1077278 TGGACATTG--AGACCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGG 1077221
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 66423
| |||||||| ||||| || || |||||| |||||| ||
Sbjct 1077220 TGTCATAGATACCCTCAATGCTGTCATCCTTCATGTCAA 1077182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172561412360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |