Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 1e-12 >seq3 Length=993733 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 || ||| ||||||||||||| | ||| ||||| ||||||||| | |||||| || Sbjct 449499 CCGGAGCTGGGCGACAAGTTCTCGTCGCGCCACGG-GCAGAAGGGCGTGGTCGGCATCAT 449557 Query 33630 GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAA 33689 ||||||| |||| |||||||| | | | ||| | || || ||| | |||| || Sbjct 449558 TGTCGACCAGGAGGACCTGCCGTTCTCCGACTCGGGCATTGTGCCCGACATCATCATGAA 449617 Query 33690 CCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 |||||| | ||||| |||||||||||||| Sbjct 449618 CCCGCACGGCTTCCCGTCGCGCATGACGGT 449647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233474093687