Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq23 122 8e-23
>seq23
Length=4176071
Score = 122 bits (134), Expect = 8e-23
Identities = 315/460 (68%), Gaps = 29/460 (6%)
Strand=Plus/Minus
Query 99328 AAGTGCGTGCAGGTGACGAAGGGC--GCCCGCG-ACAGCGGCGAGGGGTGG-CTGTGCGT 99383
||||||| || |||| |||| | | | ||| |||||||||| ||||| | | |||
Sbjct 2174572 AAGTGCGCACACGTGAAGAAGCCCTTGGCGGCGGACAGCGGCGACGGGTGCACGGCGCG- 2174514
Query 99384 CAGCACGAGGTGCCGCTTCCCGGCCGCCCCAAAGGCCCGCTGG---GCGTGCGCGCCCCA 99440
|||||||||||| ||||| || | || | | | |||| | ||| | | ||||||
Sbjct 2174513 CAGCACGAGGTGGCGCTTGGCGTCGACCTTGACGACGCGCTTGCCGGCGGGGGTGCCCCA 2174454
Query 99441 GAGCATGAACACCAT--CG-GGCCGCCCTGCGCGCTCAGGCGGGCCAGCACCGCG-TGCA 99496
| ||||||||| | || || || | ||| | | || | | || ||| ||
Sbjct 2174453 GGCCATGAACACGACGCCGCGGGTGCGGCGGGCGGCGACGAGGTCGATGAC-GCGCTGGG 2174395
Query 99497 CCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCG 99556
| ||| ||||||| || ||||||||||| | | | | |||||||| ||
Sbjct 2174394 TGAAGCGCTCCCAGCCGCGGTTGGCGTGCGAGTTGGCCTCGTGGGCGCGCACGGTCAGGC 2174335
Query 99557 AGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCCGTGCTGCG 99613
| |||||||| |||||||||||||| | ||||| ||| || ||||| | || | | ||
Sbjct 2174334 ACGTGTTGAGGAGCAGCACGCCGCGCTGGGCCCACGGCGTCAGCAGGCCGGCGCGGTTCG 2174275
Query 99614 GCCGCG---GGGTCCCGGGGAAGTTCTTCTGCACGGCCGC-GTAGATGTTCTGGAGGCTG 99669
|| || || |||| | ||| || ||| ||| | ||| ||||| | ||
Sbjct 2174274 GCGGCTCGCGGAAGCCGGCGTAGTCGTTGCGCA-GGCAGATGTACATGTTGCGCAGCGAC 2174216
Query 99670 GGCGGGATCGGAA-CGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTG---CCCGTG 99725
|||||| ||| || || || ||||||||||||||| ||||| ||||| | |||
Sbjct 2174215 GGCGGGGCCGGCGTCGGCG-GGCGCACGCTGAAGGCCAGCCCGTGCGCCTGGTTCACGT- 2174158
Query 99726 GCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACG 99765
||||||||||||||||||| | |||||| |||||||||
Sbjct 2174157 --TGTGGTAGGGGTCCTGGCCGACGATGACCACCTTGACG 2174120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440899040174040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |