Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq25 100 2e-16
>seq25
Length=4183617
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || ||||| ||| |||||| || |||||||| |||| || || |||||||
Sbjct 2767490 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTC 2767431
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||| || || | || | ||||||||||||| || | | |||||||||
Sbjct 2767430 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTG 2767371
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
||| ||| ||| | | |||||||| | ||||| ||| | || ||||| ||
Sbjct 2767370 AATCTTCGACTTCACGTTATCGATGGTATCCGACGACTCGACCTCAAGAGTGATGGTCTT 2767311
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || || || || ||||||||
Sbjct 2767310 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 2767281
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || ||||| ||| |||||| || |||||||| |||| || || |||||||
Sbjct 2767718 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTC 2767659
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||| || || | || | ||||||||||||| || | | |||||||||
Sbjct 2767658 CAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTG 2767599
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
||| ||| ||| | | |||||||| | ||||| ||| | || ||||| ||
Sbjct 2767598 AATCTTCGACTTCACGTTATCGATGGTATCAGACGACTCGACCTCCAGAGTGATGGTCTT 2767539
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || || || ||||||||
Sbjct 2767538 GCCGGTCAGGGTCTTGACGAAGATCTGCAT 2767509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251051114029
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |