Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq23 102 7e-17 >seq23 Length=4176071 Score = 102 bits (112), Expect = 7e-17 Identities = 244/356 (69%), Gaps = 25/356 (7%) Strand=Plus/Minus Query 94079 GCGTGGGCGCCCCAGAGCATGAACACCA-GCTTGGGGCGGGTCTCGCAGAGCCGCTGGAC 94137 ||| ||| ||||||| ||||||||| | || ||| | | | || | | || || | Sbjct 2174467 GCGGGGGTGCCCCAGGCCATGAACACGACGCCGCGGGTGCGGCGGGCGGCGACGA-GGTC 2174409 Query 94138 GACGGCGCGCACG---AGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCG 94194 || | ||||| | | ||| |||||||| | |||||| ||| || || || | Sbjct 2174408 GATGACGCGCTGGGTGAAGCGCTCCCAGCCGCGGTTGGCGTGCGAGTTGG---CCTCGTG 2174352 Query 94195 C---CGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCA-GGCCTC-- 94248 ||||||||||| |||||| || |||||||| ||||| | ||||| ||| || Sbjct 2174351 GGCGCGCACGGTCAGGCACGTGTTGAGGAGCAGCACGCCGCGCTGGGCCCACGGCGTCAG 2174292 Query 94249 CAGGCAGCCGTGGGCGGGCG---CG-GGCAGCGTCGG-GTA--CGTCGCCCGGACCGCCG 94301 ||||| | || || |||| || || ||| ||| ||| ||| || | | | | | Sbjct 2174291 CAGGCCGGCGCGGTTCGGCGGCTCGCGGAAGC--CGGCGTAGTCGTTGCGCAGGCAGATG 2174234 Query 94302 CGAAGATGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCC 94361 | |||||| ||| ||| ||| |||| | | || |||||||||||||||| Sbjct 2174233 T--ACATGTTGCGCAGCGACGGCGGGGCCGGCGTCGGCGGGCGCACGCTGAAGGCCAGCC 2174176 Query 94362 CGTGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACG 94417 |||| |||||| | |||||| ||||||||||||| |||||||||||||||| Sbjct 2174175 CGTGCGCCTGGTTCACGTTGTGGTAGGGGTCCTGGCCGACGATGACCACCTTGACG 2174120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458947033631640