Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq24 111 2e-20
seq25 102 1e-17
>seq24
Length=4186226
Score = 111 bits (122), Expect = 2e-20
Identities = 88/103 (85%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| ||||
Sbjct 497108 CGCGAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 497166
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533
|||||||||| ||||||||||| || ||||||||| |||| ||
Sbjct 497167 TCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCCGG 497209
>seq25
Length=4183617
Score = 102 bits (112), Expect = 1e-17
Identities = 86/103 (83%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||||||||||| ||| ||| || || ||||| || || ||||||||||| ||||
Sbjct 1060251 CGCCAAGCGTCATCGCAAGAT-TCTCCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 1060193
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533
|||| |||||||| || ||||| || ||||||||| |||| ||
Sbjct 1060192 TCCGCCGTCTGGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGG 1060150
Score = 84.2 bits (92), Expect = 3e-12
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 16571 TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACT 16630
|||||| || || |||| ||| || || ||| ||||||||||| || || |||||
Sbjct 1060039 TTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACC 1059980
Query 16631 GTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTT 16690
|||||||| | ||| |||||||||| |||| || || ||||||| | || |||||
Sbjct 1059979 GTCACCTCGCTCGATGTCGTCTATGCTCTGAAGCGCCAGGGCCGTACCCTGTACGGTTTC 1059920
Query 16691 GGAAGTTAA 16699
|| |||||
Sbjct 1059919 GGTGGTTAA 1059911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075173485097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |