Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 327 3e-84
>seq2
Length=2210479
Score = 327 bits (362), Expect = 3e-84
Identities = 1129/1736 (65%), Gaps = 36/1736 (2%)
Strand=Plus/Plus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
||||| || ||||| ||||| ||| | |||||||||||| |||| ||| | |
Sbjct 1077007 ATTGTCGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCATCTGGGGAGACAAC 1077066
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCC 363558
|| || | || || || || || ||| | || || || | ||||| || |||
Sbjct 1077067 GTCGAGCGTGTCATCGAGACCTACAA-CTTG-ATGTCCAGCAAGT-TCTTCACCCATGCC 1077123
Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618
| || || | | ||| ||||| || | | | ||| | || || ||||| || |
Sbjct 1077124 TCCCCCACCCTCTTCAACGCTGGTACCCCGCAGGCCCAGCTCTCGTCGTGCTTCCTGGTT 1077183
Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678
| |||||||| || ||| |||||||||| |||||| || |||| || || | ||
Sbjct 1077184 GACATGAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGCGCCATGATC 1077243
Query 363679 TCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737
||||||| || || || |||||| | ||||| | | ||||| || | |||
Sbjct 1077244 TCCAAGATGGCTGGTGGCATTGGTCTCAATGTCCACCGTATCCGTGCTACCGGTTC-TTA 1077302
Query 363738 CATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797
||| ||| || || || ||||| | | ||||||||||| ||||| ||||
Sbjct 1077303 TATTGCCGGAACCAATGGCACGTCCAATGGTATCATCCCCATGCTTCGCGTGTTCAACAA 1077362
Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857
|| || | || || |||||||| || |||||| || || ||||| || || ||
Sbjct 1077363 CACCGCCCGCTATGTTGACCAGGGCGGCAACAAGCGCCCCGGCGCCTTTGCCATCTACCT 1077422
Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGA 363917
|||||| || ||||| | || ||||| | || || || || || ||||| ||
Sbjct 1077423 CGAGCCGTGGCACGCCGACGTGTTCGAGTTCATGGATCTGCGCAAGAATCATGGAAAGGA 1077482
Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977
||| | || || | ||| ||||| || || ||| | | || | || ||||||||
Sbjct 1077483 GGAGGTCCGCGCCAGAGATTTGTTCCTGGCTCTGTGGATCCCCGATCTCTTCATGAAGCG 1077542
Query 363978 CGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035
|| ||| | | | | | ||| | || | ||||| |||| || || |||||| ||
Sbjct 1077543 AGTCGAG--AAGAACGCCGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGTCTTGCC 1077600
Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095
|| | || || || | | || || ||||| ||||| || | ||||| | |
Sbjct 1077601 GACTGCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGTCGCGGT 1077660
Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155
|| ||||| || || |||||||| |||| |||||| | || | |||| |||||
Sbjct 1077661 CGCAAGACCATCAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACCGAGACC 1077720
Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215
|| | |||| ||| ||||||| || |||||||||||| ||||||| || ||||
Sbjct 1077721 GGCAACCCCTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTG 1077780
Query 364216 GGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274
||||| |||| |||| |||||| || || ||||| ||||| ||| ||||||||| ||
Sbjct 1077781 GGTACCATTC-GCAGCTCCAACCTGTGCACAGAGATCATTGAGTACTGCGCTCCCGATGA 1077839
Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGT---TTG--TAAAAGATGGT 364329
| || || || ||||| || || |||| || || || | ||| || || | ||
Sbjct 1077840 GGTGGCTGTGTGCAACCTGGCCTCCCTCGCTCTGCCCGCCTACGTTGACTACAACAAGGG 1077899
Query 364330 ACT-TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT-TGCAATCTCGACA 364387
| | |||| || | || | || || ||| || || | | |||| || ||
Sbjct 1077900 CGTGTATGACTTTGAGAAGCTGCACGAGGTCACC-ATGGTGGTTGTCCGCAACCTGAACC 1077958
Query 364388 AGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCG 364442
| || || || | || || | || || || || ||| || |||||
Sbjct 1077959 GCATCATTGATGTCAACCACTACCCCGTGCCCGAGGCTCGCAACAGC-----AACATGCG 1078013
Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502
|| ||||| || ||| ||||||| ||||| || || || | ||| | || ||
Sbjct 1078014 CCACCGCCCCATCGGTGTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTCGCTCTGCGCAT 1078073
Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562
| | ||||| || | || ||||| | || || || ||||||| || || || ||
Sbjct 1078074 GCCCTTTGAGTCCGCCGAGGCTCGGGAGCTGAACCAGCAGATCTTCGAGACCATCTACCA 1078133
Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622
|| || || | || ||| || | || || |||||| ||||| || |||||
Sbjct 1078134 CGCTGCTCTGTCGGCCTCGGTGGAGATCGCCAAGGAGGAGGGAACCTACTCCACCTATGA 1078193
Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682
||| || || | || ||||| | | |||||||| | |||||||||| ||| | |
Sbjct 1078194 GGGCTCTCCCGTCTCTCAGGGTATCCTGCAGTTTGACATGTGGAATGTCAAGCCCACCGA 1078253
Query 364683 CCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCC 364741
|| ||| ||||||||| || | | | | | ||| || ||| ||||||| |
Sbjct 1078254 CCTCTGGGACTGGGATAGCCTGAAGGAGC-AGATCAAGCTTCACGGTGTTCGCAACAGTC 1078312
Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801
| | || ||||||||||| || ||| | ||||| || || |||||||||||||
Sbjct 1078313 TGCTGCTGGCTCCCATGCCCACTGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGCT 1078372
Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861
| || |||| || |||| | || ||||| || ||| | ||||| || | ||| |
Sbjct 1078373 TTGAGCCGTACACCTCCAATATCTACCAGCGCCGTGTGCTTGCTGGAGAGTTCCAGGTGG 1078432
Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921
| || || | || ||||| ||||| || |||||| ||| |||||||
Sbjct 1078433 TCAACCCGTGGTTGCTCCGCGATCTAGTCGACCTTGGCCTGTGGTCGGACTCGATGAAGA 1078492
Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT-CCAGGATTTCCAGAAGATCTG 364980
|| ||||| |||| || || || | ||||||||| |||| | | || | || |
Sbjct 1078493 ACCGCATCATTGCCGACAACGGCTCGATCCAGAACATTGCCAGCA-TCCCTGCTGACATC 1078551
Query 364981 AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCC 365040
||| || | ||||| || || |||||||||||| ||| ||| || | | ||||| |||
Sbjct 1078552 AAGGCTCTGTACAAGACGGTCTGGGAAATTTCCCAGCGCACTGTCGTGCAGATGGCTGCC 1078611
Query 365041 GATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACC 365100
||||| |||||||| || ||| ||||| | ||| | ||||| | || ||
Sbjct 1078612 GATCGTGGTGCTTTCATTGACCAGTCGCAGTCTCTGAACATCCACATGAAGGACCCCACG 1078671
Query 365101 TCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| | || |||||| ||| ||| ||||| ||||| ||||| ||
Sbjct 1078672 ATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCAAGACCGG 1078727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353115722678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |