Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_007653.1
Length=156487
Score E
Sequences producing significant alignments: (Bits) Value
seq23 107 2e-18
>seq23
Length=4176071
Score = 107 bits (118), Expect = 2e-18
Identities = 321/476 (67%), Gaps = 41/476 (9%)
Strand=Plus/Plus
Query 11408 GTCGTCATCATCGGTCAGGACCCCTATCACCAGCCCGGCCAGGCCCACGGCCTCGCGTTC 11467
|| |||||| |||| ||||||||||| ||| | |||||| ||||| || || |||
Sbjct 2174127 GTGGTCATCGTCGGCCAGGACCCCTACCACAACGTGAACCAGGCGCACGGGCTGGCCTTC 2174186
Query 11468 AGCGTCAGACCCGGC-ACCCCCGCCCCGCCCAGCCTGCGCAACAT---CCTGGCCGCGGT 11523
||||| | |||| | || || |||||||| ||||||||||| | | | || |
Sbjct 2174187 AGCGTGCG-CCCGCCGACGCCGGCCCCGCCGTCGCTGCGCAACATGTACAT--CTGCC-T 2174242
Query 11524 CCGCAACTGCTGC-CCGGAT---GCGA--CGATGAGCGGC-CAGGGGTGCCTGGAAAAGT 11576
|||||| || | |||| | |||| || || | || | || ||| || ||
Sbjct 2174243 GCGCAACGACTACGCCGGCTTCCGCGAGCCGCCGAACCGCGCCGGCCTGC-TGACGCCGT 2174301
Query 11577 GGGCCCGCGGGGGCGTCCTGCTCCTCAACACCACCCTGACGGTCCGCCGCGGAGAGCCCG 11636
|||||| | ||||| |||||||||||||| |||||| || ||| | ||| ||
Sbjct 2174302 GGGCCCAGCGCGGCGTGCTGCTCCTCAACACGTGCCTGACCGTGCGCGCCCACGAGGCCA 2174361
Query 11637 CCTCGCACGCCAAGATCGGCTGGGATCGCTTCGTCGCCAGCGTC-----CTTCGTCGCCT 11691
|||||||||||| ||||||||| |||||| | ||||| | ||||||||
Sbjct 2174362 ACTCGCACGCCAACCGCGGCTGGGAGCGCTTCACCCAGCGCGTCATCGACCTCGTCGCCG 2174421
Query 11692 CGCCGCCTCGCGCCCCGGGTTGGTGTTTATGCTCTGGGGCGCCCACGCC--CAGAGCGCG 11749
| ||||| | | || ||| | ||||| ||| ||||||| ||| |||| || ||||||
Sbjct 2174422 C-CCGCCGCAC-CCGCGGCGTCGTGTTCATGGCCTGGGGCACCCCCGCCGGCA-AGCGCG 2174478
Query 11750 --ATCCGCCCCGAC-CCCCGCGTGCACCGCGTCCTCACCTACTCGCACCCGTCGCCGCTC 11806
|| |||| || ||| |||| ||| || | | |||||||||||||||
Sbjct 2174479 TCGTCAAGGTCGACGCCAAGCG-CCACCTCGTGCTGCGCGCCGTGCACCCGTCGCCGCTG 2174537
Query 11807 TCC-------AGGGTTCCCTTCGGTTCCTGTCGCCATTTCTGCCTCGCGAACCAGT 11855
||| |||| |||| | ||| || ||| |||||||||||||||
Sbjct 2174538 TCCGCCGCCAAGGG----CTTCTTCACGTGTGCGCACTTCCGCCTCGCGAACCAGT 2174589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500630218521480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |