Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 >seq3 Length=993733 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 15038 CAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACG 15097 |||| ||| ||| ||| | ||||||||||| | || | | ||| |||||| | Sbjct 449487 CAGACGCGGCGGCCGGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGGCAGAAGGGCGTG 449546 Query 15098 TGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGAC 15157 |||||| ||| || |||||| ||| |||| || ||| || ||||| ||||||| Sbjct 449547 GTCGGCATCATTGTCGACCAGGAGGACCTGCCGTTCTCCGACTCGGGCATTGTGCCCGAC 449606 Query 15158 ATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 || ||||| ||||| || || ||||||| |||||||| Sbjct 449607 ATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGAC 449644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391778370400