Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq3 87.8 2e-12
>seq3
Length=993733
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 15038 CAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACG 15097
|||| ||| ||| ||| | ||||||||||| | || | | ||| |||||| |
Sbjct 449487 CAGACGCGGCGGCCGGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGGCAGAAGGGCGTG 449546
Query 15098 TGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGAC 15157
|||||| ||| || |||||| ||| |||| || ||| || ||||| |||||||
Sbjct 449547 GTCGGCATCATTGTCGACCAGGAGGACCTGCCGTTCTCCGACTCGGGCATTGTGCCCGAC 449606
Query 15158 ATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195
|| ||||| ||||| || || ||||||| ||||||||
Sbjct 449607 ATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGAC 449644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611391778370400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |