Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2 152 7e-32
>seq2
Length=2210479
Score = 152 bits (168), Expect = 7e-32
Identities = 285/417 (68%), Gaps = 4/417 (1%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || || | || ||||||| | |||||| ||| | || ||||| |||
Sbjct 1077596 AGACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACTCGCTTC 1077537
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| |||||||| || ||||| ||||| | || | |||||||| | ||||| |||
Sbjct 1077536 ATGAAGAGATCGGGGATCCACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTT 1077477
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| |||||| ||||| | |||| | | | || | |||||||| || | |||
Sbjct 1077476 CCATGATTCTTGCGCAGATCCATGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTAG 1077417
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | || || || ||||| || ||||| || | || | |||||||| ||
Sbjct 1077416 ATGGCAAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTCAACATAGCGGGCGGTGTTGTTG 1077357
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | | ||| || || ||||||||||| || |||||||| || | |||||
Sbjct 1077356 AACACGCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAA 1077297
Query 63320 CCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| | ||||| ||| | |||| ||||| || || || ||||| || ||||| |
Sbjct 1077296 CCGGTAGCACGGATACGGTGGACATTG--AGACCAATGCCACCAGCCATCTTGGAGATCA 1077239
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 63434
||||| || | || |||||||| ||||| || || |||||| |||||| ||
Sbjct 1077238 TGGCGCAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGTCAA 1077182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631770308400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |