Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2 500 2e-136
seq9 441 1e-118
>seq2
Length=2210479
Score = 500 bits (554), Expect = 2e-136
Identities = 1253/1888 (66%), Gaps = 69/1888 (4%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| || || | || |||| ||| | ||||||||||||||||||||||| |
Sbjct 1078774 TGAACTGGATAGGCGCCGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGAC 1078715
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
|| |||| || || ||||||| || | ||| |||| || | ||
Sbjct 1078714 CAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGG---------GT 1078664
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || ||| || ||||| |||||| | ||| | | || || || |
Sbjct 1078663 CCTT---CATGTGGATGTTCAGAGACTGCGACTGGTCAATGAAAGCACCACGATCGGCAG 1078607
Query 243921 CCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979
|||| | || || | ||| || || || | |||||||||| | | ||||| |
Sbjct 1078606 CCATCTGCACGACAGTGCG-CTGGGAAATTTCCCAGACCGTCTTGTACAGAGCCTTGATG 1078548
Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039
| | |||| | | |||||||| | |||||| |||| | | |||| || | |
Sbjct 1078547 TCAGCAGGGATGCTGGCAATGTTCTGGATCGAGCCGTTGTCGGCAATGATGCGGTTCTTC 1078488
Query 244040 ATGTTATCGTTCCACAGGCCCAAG-CG-CTCCAGCGCCTCGACCAGGTGCCTGTTCACCA 244097
|| || ||||||||| | | || || | ||| || || | ||| ||||
Sbjct 1078487 ATCGAGTCCGACCACAGGCCAAGGTCGACTAGATCGCG--GAGCAACCACGGGTTGACCA 1078430
Query 244098 CCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGC 244157
|||| |||||||| | ||||| ||||||||||||| ||| | || |||||| | ||
Sbjct 1078429 CCTGGAACTCTCCAGCAAGCACACGGCGCTGGTAGATATTGGAGGTGTACGGCTCAAAGC 1078370
Query 244158 TCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGAC 244217
||| ||||||| || ||||||| || || ||||| |||||||| | || ||||||||
Sbjct 1078369 ACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGAC 1078310
Query 244218 TGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TCCCACATGC 244274
|||| | || ||||| || ||| ||| ||| ||| | ||||| |
Sbjct 1078309 TGTTGCGAACACCGTGAAGCTTGAT-------CTG--CTCCTTCAGGCTATCCCA---GT 1078262
Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334
|| ||||||| | | |||| |||||||||||||||||| | |||| |||||
Sbjct 1078261 CCCAGAGGTCGGTGGGCTTGACATTCCACATGTCAAACTGCAGGATACCCTGAGAGACGG 1078202
Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCG 244393
| |||||| ||||| | ||||| || || || ||| | || || | || |
Sbjct 1078201 GAGAGCCCTCATAGGTGGAGTAGGTTCCCTCCTCCTTGGCGATCTCCACCGAGGCCGAC- 1078143
Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453
|| || |||| ||||||||||||||||||| || ||||| || || |||| | || |
Sbjct 1078142 AGAGCAGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTCAGCTCCCGAGCCTCGGCGGAC 1078083
Query 244454 GTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATG 244513
||||| |||| || | ||| | ||||| || ||||| || || | ||||||
Sbjct 1078082 TCAAAGGGCATGCGCAGAGCGAGGAAAGCATCGGCAAGACCCTGAACACCAACACCGATG 1078023
Query 244514 GGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573
|| | ||| ||| ||||| | || |||||||||||||| |||| | || ||
Sbjct 1078022 GGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCGGGCACGGGGTAGTGGTTGACATCAATG 1077963
Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633
| ||| ||||||||| | || | ||| ||| |||| || |||||| |||
Sbjct 1077962 ATGCGGTTCAGGTTGCGGACAACCACCATGGTGACCTCGTGCAGCTTCTCAAAGTCATAC 1077903
Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGG 244693
|| ||| | | | || | | | | || || |||| | |||||||
Sbjct 1077902 ACGC------CCTTGTTG-TAGTCAACGT-----AGGCGGGCAGAGCGAGGGAGGCCAGG 1077855
Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753
||||| || |||||||| || | | ||||| | ||||| ||||| ||||| |
Sbjct 1077854 TTGCACACAGCCACCTCATCGGGAGCGCAGTACTCAATGATCTCTGTGCACAGGTTGGAG 1077795
Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813
| ||||| ||||||| || || ||| |||| ||||||| ||||||||| |||
Sbjct 1077794 CTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGC 1077735
Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCC 244873
|||||||| ||||||||| ||| || |||||| | || ||| || | | ||||
Sbjct 1077734 ATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGAGCC 1077675
Query 244874 TTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933
|||| ||| ||||| | ||||| |||||||| ||||||||||||||||||
Sbjct 1077674 TTGATGGTCTTGCGACCGCGACCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAACTCC 1077615
Query 244934 GGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCG 244993
||| || ||| | || ||||||||| |||||||| ||| |||||||| ||
Sbjct 1077614 TCGCCGTAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCG 1077555
Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053
| || ||| | || ||||||||| ||||||||||| || ||| |||| | || |||
Sbjct 1077554 TTCTTCTCGACTCGCTTCATGAAGAGATCGGGGATCCACAGAGCCAGGAACAAATCTCTG 1077495
Query 245054 GTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113
| | ||| ||| ||| ||||| | ||| |||| || || || |||||| ||
Sbjct 1077494 GCGCGGACCTCCTCCTTTCCATGATTCTTGCGCAGATCCATGAACTCGAACACGTCGGCG 1077435
Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173
||||| ||||| | ||||| || | ||||||||| ||||||||||| ||||||| |
Sbjct 1077434 TGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGT----C 1077379
Query 245174 ATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
| | | || ||| |||||| | ||| || | || | || || || || |||
Sbjct 1077378 AACATAGCGGGCGGTGTTGTTGAACACGCGAAGCATGGGGATGATACCATTGGACGTGCC 1077319
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTA 245285
||||| || || || | || | | | || | | | ||||||| || |
Sbjct 1077318 ATTGGTTCCGGCAATATAAGAACCGGTAGCAC---GGATAC-GGTGGACATTGAGACCAA 1077263
Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345
|| || || ||||||||| | ||||||| |||||| |||||| || ||||| |
Sbjct 1077262 TGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCCTCAA 1077203
Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405
||||||| |||||||| | ||| ||||| || || ||||||| || ||| | | |
Sbjct 1077202 TGCTGTCATCCTTCATGTCAACCAGGAAGCACGACGAGAGCTGGGCCTGCGGGGTACCAG 1077143
Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCT 245465
|||||| || |||||| ||| ||||| ||| | ||| || | || ||| ||||
Sbjct 1077142 CGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATCAAGTTGTAGGTCT 1077083
Query 245466 GGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525
|| | | |||| |||||| || ||| | || | ||||| ||||||
Sbjct 1077082 CGATGACACGCTCGACGTTGTCTCCCCAGATGCCAACAGCAACACGCATGATCATGTGCT 1077023
Query 245526 GGGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCT 245582
|||| |||| || || || | |||||||| ||| || ||||| || ||||
Sbjct 1077022 GGGGGCGCTCGACAATCTTGCCGTCAAG---CTTGAGCAGGTAAGACCGCTCTAGGGTCT 1076966
Query 245583 TGAACCCAAAGTACGAGTAGCCAAAGTC 245610
|||| ||||||||| |||| |||||
Sbjct 1076965 TGAAGCCAAAGTACTGGTAGTTGAAGTC 1076938
>seq9
Length=477563
Score = 441 bits (488), Expect = 1e-118
Identities = 620/860 (72%), Gaps = 28/860 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| ||||||||||| ||||||
Sbjct 52250 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACGGCCGAGGAGATCGACCTG 52191
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415
||||||| | | |||| | || | || | || |||| || ||| ||
Sbjct 52190 TCCAAGGATATCCATGACTGGAACA-ACCGCCTAACCGATGACGAGCGTTTCTTCATCTC 52132
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || |||||||||||||| ||||||||||| ||||| |||||||||| | |
Sbjct 52131 GCACATTCTTGCCTTCTTCGCCGCGTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCG 52072
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct 52071 TTTCAGCGCCGAGGTGCAGGTGCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 52012
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| | ||||||| |||| |||||| ||| ||
Sbjct 52011 GGAGAACATCCACTCCGAGACCTACTC---GCTGCTCATTGACACCTACATCAAGGAGCC 51955
Query 42593 CGTCG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
| ||| |||| | | || ||||| ||||| || || || ||||||||| |||||||
Sbjct 51954 C-TCGCAGCGCACCTTCCTCTTCAACGCCATTGACACCATCCCCTGCATCCGCAAGAAGG 51896
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAG 42711
| |||||||| || |||||| || || | | | |||| || | ||||| |
Sbjct 51895 CCGACTGGGCCATCCGCTGGATTCAGGACAAGGAGTCGTCCTACGGCCAGCGCCTGGTTG 51836
Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771
||||| ||||||||||||||||||||||| || |||||| | || ||||||||| |||
Sbjct 51835 CCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCTCGTCGATCTTCTGGATCA 51776
Query 42772 AGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
|| || | ||||||||| || |||||||| ||||| || ||| | |||||||
Sbjct 51775 AGAAGCGCGGCATGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAGG 51716
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891
| ||||| | ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct 51715 GTCTGCACACCGACTTCGCCTGCCTGCTCTTCTC---CCACCTCAAGCACCGCCCCAGCA 51659
Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC 42951
|||| ||| | |||||||| || ||||||| || ||| |||||||| ||||
Sbjct 51658 AGGACGTCATCCAGAGAATCATCACCGATGCCGTGGCCATTGAGCAGGAGTTCATCACCG 51599
Query 42952 AGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGT 43011
|| | |||||| ||||| | ||||||||| | ||| ||| |||||||| |||
Sbjct 51598 AGGCTCTGCCCTGCGCCCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTACATCGAGT 51539
Query 43012 ACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CGCC----TCTACAACACGC 43065
|||||||||| | |||| | | ||| |||| || || | ||||||| |
Sbjct 51538 TCGTCGCCGAC---CGCCTG---CTGGTGGCTCTCGGCAACGACAAGGTCTACAAGGCCA 51485
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||||||||| ||||||||||||||| ||| |||||||||||||| || ||||
Sbjct 51484 CCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCTTTGAGA 51425
Query 43126 AGCGCGTCGCCGACTACCAG 43145
|||| || | ||||||||||
Sbjct 51424 AGCGTGTTGGCGACTACCAG 51405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338857677040
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