Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq25 84.2 2e-11
>seq25
Length=4183617
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| || || ||||| || || |||||||||||||| |||||||| || |
Sbjct 2767963 CCACCGCGCAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 2767904
Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
| | || || | || || | |||||||| || || |||||||||||||| ||| ||
Sbjct 2767903 AGAGTG-CGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGG 2767845
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079
| || ||| || ||| ||| || ||| | | | |||| | |||||
Sbjct 2767844 GATGCCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCAATGGTATCCGATGATTCCAC 2767785
Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| | || || || ||||| || || || ||||| ||||| |||||
Sbjct 2767784 TTCCAAGGTGATCGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 2767737
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || ||||||| ||||| ||| ||||||||| |||||||| || | || ||
Sbjct 2767726 AGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGG 2767667
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
|||| |||| ||||| || || || || || |||||||||||| || | || |||
Sbjct 2767666 CCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCC 2767607
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089
|||||| ||| || ||| | | | | |||||| || ||| || | ||
Sbjct 2767606 TTGTCCTGAATCTTCGACTTCACGTTATCGATGGTATCAGACGACTCGACCTCCAGAGTG 2767547
Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || || ||||| || || || || ||||| |||||
Sbjct 2767546 ATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2767509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062259663258
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |