Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2 282 4e-71
>seq2
Length=2210479
Score = 282 bits (312), Expect = 4e-71
Identities = 1087/1681 (65%), Gaps = 56/1681 (3%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || || ||| ||| ||||| |||||| | || |||
Sbjct 1076944 AACTACCAGTACTTTGGCTTCAAGACCCTAGAGCGGTCTTACCTGCTCAAGCTTGACGGC 1077003
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || || | || || || ||
Sbjct 1077004 AAGATTGTCGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCATCTGGGGAGAC 1077063
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| | | ||| | | | | || ||| |||| | ||| |||
Sbjct 1077064 AACGTCGAGCGTGTCATCGAGACCTACAACTTGATGTCCAGCAAGTTCTTCACCCATGCC 1077123
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| ||||| |||||||| || |||||| | | ||| | || ||||| |||||| |
Sbjct 1077124 TCCCCCACCCTCTTCAACGCTGGTACCCCGCAGGCCCAGCTCTCGTCGTGCTTCCTGGTT 1077183
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| ||| || || | |||| ||||||| ||| || | ||
Sbjct 1077184 GAC-ATGAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGCGCCATGAT 1077242
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
||| || || || || || || ||| ||||||| |||| ||||| | |||||
Sbjct 1077243 CTCCAAGATGGCTGGTGGCATTGGTCTCAATGTCCAC--CGTATCCGTGCTACCGGTTCT 1077300
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|| || ||| ||||||||||| ||||| || || |||| ||||| || || ||||||
Sbjct 1077301 TATATTGCCGGAACCAATGGCACGTCCAATGGTATCATCCCCATGCTTCGCGTGTTCAAC 1077360
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || ||||| || |||||||| || | | | || | || || ||||
Sbjct 1077361 AACACCGCCCGCTATGTTGACCAGGGCGGCAACAAGCGCCCCGGCGCCTTTGCCATCTAC 1077420
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|||||||| |||||||| |||||| | ||||| || ||||| ||||| || || ||
Sbjct 1077421 CTCGAGCCGTGGCACGCCGACGTGTTCGAGTTCATGGATCTGCGCAAGAATCATGGAAAG 1077480
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | |||||||| | ||| ||||| ||| | || || || || |||||
Sbjct 1077481 GAGGAGGTCCGCGCCAGAGATTTGTTCCTGGCTCTGTGGATCCCCGATCTCTTCATGAAG 1077540
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| |||||||| ||| ||| |||| ||| | || ||||| || || ||||| || ||
Sbjct 1077541 CGAGTCGAGAAGAACGCCGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGTCTTGCC 1077600
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGC 94430
||| | || | || || | | |||| | ||||| | |||| | ||
Sbjct 1077601 GACTGCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGTCGCGGT 1077660
Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490
| | ||| || | ||| |||||||||| | ||| | || | ||| |||||
Sbjct 1077661 C-GCAAGACCATCAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACCGAGAC 1077719
Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
|| | |||| ||| ||| |||||| | ||| |||| |||| ||||||| || |||
Sbjct 1077720 CGGCAACCCCTTCATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACC 1077778
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
| || || ||||| || |||||||| ||||| | ||||| |||| || |
Sbjct 1077779 TGGGTACCATTCGCAGCTCCAACCTGTGCACAGAGATCATTGAGTACTGCGCTCCCGATG 1077838
Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA 94669
|| | |||||||| ||||||| |||| || ||| || | | ||| || |||||
Sbjct 1077839 AGGTGGCTGTGTGCAACCTGGCCTCCCTCGCTCTGCCCGCCTACGT------TGACTACA 1077892
Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT-CTTG 94728
| | || | || || | ||| ||| || | || || | ||||| |||
Sbjct 1077893 --ACAAGGGCGT-GTATGACTTTGAGAAGC---TGCA---CGAGGTCACCATGGTGGTTG 1077943
Query 94729 -----AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783
||||||||| | | || || ||| ||||||||| || ||||| |||
Sbjct 1077944 TCCGCAACCTGAACCGCATCATTGATGTCAACCACTACCCCGTGCCCGAGGCTCGCAACA 1078003
Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843
||| || || || |||||||| | || || |||||| | || || || | |
Sbjct 1078004 GCAACATGCGCCACCGCCCCATCGGTGTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTCG 1078063
Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903
|||| |||||| || || | ||| || || |||| | | || ||||| |
Sbjct 1078064 CTCTGCGCATGCCCTTTGAGTCCGCCGAGGCTCGGGAGCTGAACCAGCAGATCTTCGAGA 1078123
Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGG---C 94960
||| || ||| || || || || | | |||| ||| || ||| |
Sbjct 1078124 CCATCTACCACGCTGCTCTGTCGGCCTCGGTGGAGATCGCCA---AGGA-GGAGGGAACC 1078179
Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020
|| | | | | || || ||| | ||||| || | ||||| ||| | |||
Sbjct 1078180 TACTCCA--CCTATGAGGGCTCTCCCGTCTCTCAGGGTATCCTGCAGTTTGACATGTGGA 1078237
Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGA-AG-CTCTACGCGCTGATGTTATCAA--- 95075
||| |||||| | | || | |||||||| || || | | || | |||||
Sbjct 1078238 ATGTCAAGCCCACCGACCTCTGGGACTGGGATAGCCTGAAGGAGCAG-----ATCAAGCT 1078292
Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135
|||||||| ||| ||||| |||| ||||||||||| ||| || |||||||
Sbjct 1078293 TCACGGTGTTCGCAACAGTCTGCTGCTGGCTCCCATGCCCACTGCCAGTACCTCGCAGAT 1078352
Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195
|||||||||||||||| || || || | ||||||||| | ||| | | || |||||
Sbjct 1078353 TCTTGGCAACAACGAGTGCTTTGAGCCGTACACCTCCAATATCTACCAGCGCCGTGTGCT 1078412
Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTG 95254
|| || || |||| || ||||| | | || || || || | || | || ||
Sbjct 1078413 TGCTGGAGAGTTCCAGGTGGTCAACCCGTGGTTGCTCCGCGATCTAGTCGAC-CTTGGCC 1078471
Query 95255 TGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACAT-- 95312
||||| ||| | | ||||||| | | || ||||||||| ||||||||||
Sbjct 1078472 TGTGGTCGGACTCGATGAAGAACCGCATCATTGCCGACAACGGCTCGATCCAGAACATTG 1078531
Query 95313 CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| || || || | ||||||||||| || |||||||| || ||||| || | |||||
Sbjct 1078532 CCAGC--ATCCCTGCTGACATCAAGGCTCTGTACAAGACGGTCTGGGAAATTTCCCAGCG 1078589
Query 95373 C 95373
|
Sbjct 1078590 C 1078590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723020662840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |