Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq25 104 2e-16
seq27 87.8 1e-11
>seq25
Length=4183617
Score = 104 bits (114), Expect = 2e-16
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| ||||| ||| | |||||||| || || |||||||||||| ||| || || || |||
Sbjct 2871350 ATCGGTATCGATCTCGGAACCACTTACAGCTGTGTTGGTGTTATGCAGAAGGGCAAGGTT 2871291
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
|| ||| | | ||| || || |||||| | | ||||| |||||||| | ||||| ||
Sbjct 2871290 GAGATTCTCGTCAACGACCAGGGTAACCGTATCACTCCTTCTTATGTGGCCTTCACCGAG 2871231
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174
|| | || ||||| ||||| || || | || ||| ||| || || | ||| ||
Sbjct 2871230 GACGAGCGGTTGGTTGGAGATGCGGCCAAGAACCAGGCCGCTGCCAACCCCATCAACACC 2871171
Query 550175 ATTTTTGATG 550184
|| |||||||
Sbjct 2871170 ATCTTTGATG 2871161
>seq27
Length=2670746
Score = 87.8 bits (96), Expect = 1e-11
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
|| || || || || || || || || || ||||| || || || |||||||| | |||
Sbjct 1988919 ACCGTTCCTGCCTACTTCAACGATTCGCAGCGTCAGGCCACCAAGGATGCTGGCCAAATT 1988860
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| || ||||||||||| ||| || |||| || || ||||| ||||| || || || ||
Sbjct 1988859 GCCGGCCTTAATGTTCTGCGTGTTGTCAACGAGCCCACTGCCGCTGCCCTGGCCTACGGT 1988800
Query 550529 CTTGATAA 550536
||||| ||
Sbjct 1988799 CTTGAGAA 1988792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029294466349210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |