Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2 212 7e-50
>seq2
Length=2210479
Score = 212 bits (234), Expect = 7e-50
Identities = 941/1470 (64%), Gaps = 49/1470 (3%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT--TCAACGGCTCGATGGCATCCTCA 75203
|||||||| |||| ||||| ||| | || || |||| ||| || |||| |
Sbjct 1076953 TACTTTGGCTTCAAGACCCTAGAGCGGTCTTACCTGCTCAA--GCTTGACGGCAAGATTG 1077010
Query 75204 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTG 75263
| || ||| ||| ||||| ||||||| || || | |||||| || || || | |
Sbjct 1077011 TCGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCATCTGGGGAGACAACGTCG 1077070
Query 75264 ATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACC 75321
| |||| | ||||| ||| || ||||||| |||| | | ||| || || | ||
Sbjct 1077071 AGCGTGTCATCGAGACCTACAACTTGATGTCCAGCAAGTTCT--TCACCCATGCCTCCCC 1077128
Query 75322 AACCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCA 75380
||||||||||| |||||||| || || || ||| | || |||||||| | | ||
Sbjct 1077129 CACCCTCTTCAACGCTGGTACCCCGCAGGCC-CAGCTCTCGTCGTGCTTCCTGGTTGACA 1077187
Query 75381 ACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAA 75440
||||| ||| || | |||||||||| || || | | || || ||||| |
Sbjct 1077188 TGAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCA 1077247
Query 75441 AGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTC 75500
|| |||||| || ||||| | | |||| | | | || | ||| ||||
Sbjct 1077248 AGATGGCTGGTGGCATTGGTCTCAATGTCCACCGTATCCGTGCTACCGGTTCTTATATTG 1077307
Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560
|| || ||||| || ||||||| || || ||||||||||| || ||| ||| |
Sbjct 1077308 CCGGAACCAATGGCACGTCCAATGGTATCATCCCCATGCTTCGCGTGTTCAACAACACCG 1077367
Query 75561 CGCGCTATGTAAATCAAGCGGGGCGTCG-CAAG------GGGTCCATCGCGGTCTACTTG 75613
| |||||||| | || ||||| | |||| || || | || ||||| |
Sbjct 1077368 CCCGCTATGTTGACCA----GGGCGGCAACAAGCGCCCCGGCGCCTTTGCCATCTACCTC 1077423
Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAA 75673
|| || ||||| ||||| | | |||||| | || | || || || || | ||
Sbjct 1077424 GAGCCGTGGCACGCCGACGTGTTCGAGTTCATGGATCTGCGCAAGAATCATGGAAAGGAG 1077483
Query 75674 GAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733
|||| || |||||| | || | |||||||| || || || |||||||||||
Sbjct 1077484 GAGGTCCGCGCCAGAGATTTGTTCCTGGCTCTGTGGATCCCCGATCTCTTCATGAAGCGA 1077543
Query 75734 GTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793
|| ||| || | | ||| |||| | || || || || || ||||| |||||
Sbjct 1077544 GTCGAGAAGAACGCCGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGTCTTGCCGAC 1077603
Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAG---CC 75850
|| |||||||| || ||||| ||| ||||| || | |||||| | | |
Sbjct 1077604 TGCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGTCGCGGTCGC 1077663
Query 75851 AATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909
|| ||| | | || | | || | | ||| | || || ||| | | ||||| |||||
Sbjct 1077664 AA---GACCAT-CAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACCGAGAC 1077719
Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969
|| | || | ||||| |||||||| || ||| ||||| ||||| ||||| |
Sbjct 1077720 CGGCAACCCCTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCT 1077779
Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029
||| || || ||||| || || ||||| || || | |||||| | | |||||
Sbjct 1077780 GGGTACCATTCGCAGCTCCAACCTGTGCACAGAGATCATTGAGTACTGCGCTCCCGATGA 1077839
Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG 76089
| |||||| ||||| |||| || |||| || || || || | | | | |
Sbjct 1077840 GGTGGCTGTGTGCAACCTGGCCTCCCTCGCTCTGCCCGCCTACGTTGACTACAACAAGGG 1077899
Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149
| | ||| | ||| || || || || |||| | | | ||| | || || |||||
Sbjct 1077900 CGTGTATGACTTTGAGAAGCTGCACGAGGTCACCATGGTGGTTGTCCGCAACCTGAACCG 1077959
Query 76150 AGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACA 76206
||||||| || || ||||| ||| || ||| | || || ||||| ||
Sbjct 1077960 CATCATTGATGTCAACCACTACCCCGTGCCCGAGGCT-CGCAACAG--CAACATGCGCCA 1078016
Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGC 76266
| | || || ||| | |||||||| ||||| || |||| ||| | | || |||
Sbjct 1078017 CCGCCCCATCGGTGTTGGTGTTCAGGGTCTTGCCGATG-----CTTTCCTCGCTCTGCGC 1078071
Query 76267 A-----TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTAT 76321
| ||||| || | || || |||| |||| | ||||| || ||||| ||
Sbjct 1078072 ATGCCCTTTGAGTCCGCCGAGGCTCGGGAGCTGAACCAGCAGATCTTCGAGACCATCTAC 1078131
Query 76322 CACGCATCCCTGGAGG-CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATT 76380
||||| | ||| || | | || || | || | | | || |||| || |
Sbjct 1078132 CACGCTGCTCTGTCGGCCTCGGTG-GAGATCGCCAAGGAGGAGGGAACCTACTCCACCTA 1078190
Query 76381 TGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA 76440
|||||| ||||||| || || || | || |||||||| |||| |||| || || || |
Sbjct 1078191 TGAGGGCTCTCCCGTCTCTCAGGGTATCCTGCAGTTTGACATGT-GGAATGTCAAGCCCA 1078249
Query 76441 GC-TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 76499
| | || ||||||||| || ||||| | |||||| | ||| |||| ||||
Sbjct 1078250 CCGACCTCTGGGACTGGGATAGCCTGAAGGAGCAGATCAAGCTTCACGGTGTTCGCAACA 1078309
Query 76500 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 76559
|||| || |||| || ||||| || ||| ||| | || || | || || || || |
Sbjct 1078310 GTCTGCTGCTGGCTCCCATGCCCACTGCCAGTACCTCGCAGATTCTTGGCAACAACGAGT 1078369
Query 76560 GCTTTGAACCATACACAACAAACATCTACC 76589
||||||| || ||||| | || |||||||
Sbjct 1078370 GCTTTGAGCCGTACACCTCCAATATCTACC 1078399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569383743520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |