Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq23 140 3e-28 >seq23 Length=4176071 Score = 140 bits (154), Expect = 3e-28 Identities = 203/287 (71%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | |||| || |||||| |||||| |||||||| Sbjct 3557070 TCGGTCTCGGGGTTTTTGCACTTCTTGCACAGGACGAACTTGTTGATGAAGCCATCAAGA 3557129 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 ||||||| | ||| || ||||||| |||||||| ||| | || |||| | Sbjct 3557130 TGGTCCTGGAGCTTGCTGGCATCGTGGGCGCCGTTGATGATCCAGCGGTCGTCCGGAGGA 3557189 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 |||| | ||||| ||||| |||||| | ||||||||||| | |||| | ||||| Sbjct 3557190 TCGATGTTGGTTTGGGCGCCAAGCTCGAAGCCGAAGTACTTGATGACGTAAGAGCCCGGA 3557249 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || | || | || |||| | || |||||||| || |||||||||||||||||| Sbjct 3557250 CGGGCGAGGGACTGAGCGACGCTGCTCAGGTTGACGACAACGGTCTTGATGCCGTTGCCC 3557309 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 || || |||| ||||| ||||| ||| |||||||| ||||| Sbjct 3557310 TTGCCCTCGATCTTGGTCTGGATGCTGTCCATCTTGTAGCGATAGAA 3557356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841454086297