Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq25 100 2e-16
>seq25
Length=4183617
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || || | |||| || ||||||||||| || || |||||||| |||||
Sbjct 2767963 CCACCGCGCAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 2767904
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || | || || || || ||||||| |||||||| || | ||
Sbjct 2767903 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGG 2767844
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || ||| ||| ||| || | ||| | ||| || |||||||||
Sbjct 2767843 ATGCCCTCCTTATCCTGAATCTTCGACTTC-ACGTTGTCAATGGTATCCGATGATTCCAC 2767785
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | |||||||| || || || | || || || ||||||||||||
Sbjct 2767784 TTCCAAGGTGATCGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATA 2767736
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||| || || ||| ||| || || |||||||| || ||
Sbjct 2767508 ACCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 2767449
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| |||| || | || ||||| || || || | |||||||||||| | ||
Sbjct 2767448 CAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGG 2767389
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCAC 33701
| || || ||||| ||| ||| |||| || | ||| || || || ||
Sbjct 2767388 GATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTATCGATGGTATCCGACGACTCGAC 2767329
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|||| ||||| || || || || | || || || ||||||||||||
Sbjct 2767328 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 2767280
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | || | |||||| || || ||| ||| || || |||||||| || ||
Sbjct 2767736 ACCACCACGTAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 2767677
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| |||| |||| || ||||| || || || | |||||||||||| | ||
Sbjct 2767676 CAGGGTGCGGCCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGG 2767617
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCAC 33701
| || || ||||| ||| ||| |||| || | ||| || || || ||
Sbjct 2767616 GATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTATCGATGGTATCAGACGACTCGAC 2767557
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || || || || | || || || ||||||||||||
Sbjct 2767556 CTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATA 2767508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703883823680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |