Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= NC_028742.1 Length=70270 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 2e-13 >seq27 Length=2670746 Score = 89.7 bits (98), Expect = 2e-13 Identities = 134/183 (73%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 48055 CGAGGTCGAGCACCAG--AGCGTCCGACTTGCCGGGGTACAGGCGGAGCGCGCGACCGAC 48112 ||| ||| ||||| | |||| ||| |||| ||| || ||| || | |||| || | Sbjct 2100197 CGAAGTCCAGCACGTGGCAGCG-CCG-CTTGTCGGCGTGCAGCCGCATGCCGCGGCCAAT 2100140 Query 48113 CATCTGCGAATACAGGTTGCGCGAGCGGGTCGGGCGGGCGAGCACCACGGTGTCGCACAT 48172 ||||||| ||||||||||||||| ||||| || |||||||||||| |||| Sbjct 2100139 CATCTGCACGAGCAGGTTGCGCGAGCGCGTCGGCCGCGCGAGCACCACGCAGTCGACGCG 2100080 Query 48173 CGGGAAGTCAGCGCCCTCGGTCAACAC-CTGCACGGTCACCAGCGCCCGGCACTCGCCGG 48231 ||||| ||| | ||||||||| ||||| | ||| | | |||||| | ||| | |||||| Sbjct 2100079 CGGGATGTCCGTGCCCTCGGTGAACACGCCGCA-GTTGACCAGCACGCGGAA--CGCCGG 2100023 Query 48232 ACC 48234 || Sbjct 2100022 CCC 2100020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224739120568739