Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq29 89.7 5e-13
>seq29
Length=474253
Score = 89.7 bits (98), Expect = 5e-13
Identities = 126/171 (74%), Gaps = 6/171 (4%)
Strand=Plus/Plus
Query 6856 CTGGTCCGCTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCGCCCCAAAGT 6914
|||||| | |||||||| | |||||| | || ||| | || ||||| || |||||||
Sbjct 85423 CTGGTCGACGCCCTGTCCGGTATAGTCGGTTTTCGCATCGACG-TACTCGGCACCAAAGT 85481
Query 6915 GTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA--CCC 6972
| | ||||||||| ||||| ||||||||||| ||||| | ||||| | | | ||
Sbjct 85482 GGCGCCACTGGAAGCCGTACACCGGGCCCAAATCGCCGACTTCCCG-GTGGCCTAGGCCG 85540
Query 6973 CCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023
||| |||| || || || || || |||| ||||||||||||| || ||
Sbjct 85541 ACGC-TGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCC 85590
Score = 89.7 bits (98), Expect = 5e-13
Identities = 126/171 (74%), Gaps = 6/171 (4%)
Strand=Plus/Minus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCC 34379
|| || ||||||||||||| |||| || || || || || |||| ||| || |
Sbjct 85590 GGCGTCAAGATCTGGGACGGCAACGGCTCGCGCGAGTTCCTCGACA-GCGTCGGCCTAGG 85532
Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439
| | ||||| | ||||| ||||||||||| ||||| ||||||||| | |||||||| |
Sbjct 85531 CCAC-CGGGAAGTCGGCGATTTGGGCCCGGTGTACGGCTTCCAGTGGCGCCACTTTGGTG 85473
Query 34440 CGGAGTATCGGGGGAGCG-AAGCGGACTATTCGGGACAGGGAGCGGACCAG 34489
| ||||| || | ||| || | |||||| | |||||||| | ||||||
Sbjct 85472 CCGAGTA-CGTCGATGCGAAAACCGACTATACCGGACAGGGCGTCGACCAG 85423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262237504880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |