Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq23 86.0 4e-12 >seq23 Length=4176071 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| ||||| || || ||||| || || || || ||| || Sbjct 893662 ATGCAGATTTTCGTGAAGACCCTTACGGGCAAGACTATCACCCTTGAGGTGGAGTCCTCG 893603 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | || ||| | || | || || ||||| || || | || || || || Sbjct 893602 GATACTATCGACAATGTCAAGTC-GAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 893544 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| ||||| || || || || | ||||| | ||| ||||| Sbjct 893543 ACAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTTCCGACTACAA 893484 Query 23790 CATACAAAA 23798 ||| || || Sbjct 893483 CATCCAGAA 893475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009480534732